Hb_004319_080

Information

Type -
Description -
Location Contig4319: 66639-80171
Sequence    

Annotation

kegg
ID rcu:RCOM_0852450
description GPI ethanolamine phosphate transferase, putative
nr
ID XP_012082184.1
description PREDICTED: GPI ethanolamine phosphate transferase 1 [Jatropha curcas]
swissprot
ID Q8WZK2
description GPI ethanolamine phosphate transferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=its8 PE=1 SV=1
trembl
ID A0A067LL04
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09654 PE=4 SV=1
Gene Ontology
ID GO:0005789
description gpi ethanolamine phosphate transferase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42290: 71836-72973 , PASA_asmbl_42291: 73198-74248 , PASA_asmbl_42292: 74302-76137 , PASA_asmbl_42293: 77799-78316 , PASA_asmbl_42294: 78365-79113 , PASA_asmbl_42295: 80038-80149
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004319_080 0.0 - - PREDICTED: GPI ethanolamine phosphate transferase 1 [Jatropha curcas]
2 Hb_000035_470 0.0525833311 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
3 Hb_000329_800 0.0578361447 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001301_150 0.0613090323 - - PREDICTED: UPF0136 membrane protein At2g26240 [Vitis vinifera]
5 Hb_001040_100 0.0672119698 - - PREDICTED: general transcription factor IIH subunit 4 [Jatropha curcas]
6 Hb_003883_060 0.0688398912 transcription factor TF Family: BSD PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Jatropha curcas]
7 Hb_000640_170 0.0710855788 - - PREDICTED: uncharacterized protein LOC105642632 isoform X2 [Jatropha curcas]
8 Hb_163175_010 0.071707631 - - hypothetical protein CISIN_1g036035mg, partial [Citrus sinensis]
9 Hb_000976_140 0.074185875 - - PREDICTED: uncharacterized protein LOC105646208 isoform X1 [Jatropha curcas]
10 Hb_000302_310 0.0749454962 - - PREDICTED: glutaminyl-peptide cyclotransferase-like [Jatropha curcas]
11 Hb_002439_010 0.0753958052 - - PREDICTED: DNA damage-inducible protein 1 [Jatropha curcas]
12 Hb_001021_150 0.0778283035 - - PREDICTED: metal tolerance protein C1 [Jatropha curcas]
13 Hb_000392_430 0.0779907652 - - PREDICTED: uncharacterized protein LOC105640501 [Jatropha curcas]
14 Hb_001247_310 0.077997007 transcription factor TF Family: C2H2 hypothetical protein POPTR_0005s00450g [Populus trichocarpa]
15 Hb_003159_140 0.0788740942 - - conserved hypothetical protein [Ricinus communis]
16 Hb_168978_030 0.0791966702 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 8 [Jatropha curcas]
17 Hb_000075_040 0.079253948 - - PREDICTED: aldo-keto reductase family 4 member C9-like [Jatropha curcas]
18 Hb_002681_090 0.0793014739 - - PREDICTED: golgin candidate 6 isoform X1 [Jatropha curcas]
19 Hb_006831_140 0.0794164699 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
20 Hb_000111_320 0.0796727709 transcription factor TF Family: bZIP Transcription factor HBP-1b(c1), putative [Ricinus communis]

Gene co-expression network

sample Hb_004319_080 Hb_004319_080 Hb_000035_470 Hb_000035_470 Hb_004319_080--Hb_000035_470 Hb_000329_800 Hb_000329_800 Hb_004319_080--Hb_000329_800 Hb_001301_150 Hb_001301_150 Hb_004319_080--Hb_001301_150 Hb_001040_100 Hb_001040_100 Hb_004319_080--Hb_001040_100 Hb_003883_060 Hb_003883_060 Hb_004319_080--Hb_003883_060 Hb_000640_170 Hb_000640_170 Hb_004319_080--Hb_000640_170 Hb_015807_050 Hb_015807_050 Hb_000035_470--Hb_015807_050 Hb_001021_150 Hb_001021_150 Hb_000035_470--Hb_001021_150 Hb_168978_030 Hb_168978_030 Hb_000035_470--Hb_168978_030 Hb_002073_190 Hb_002073_190 Hb_000035_470--Hb_002073_190 Hb_000976_140 Hb_000976_140 Hb_000035_470--Hb_000976_140 Hb_000329_800--Hb_000035_470 Hb_000329_800--Hb_001301_150 Hb_004846_220 Hb_004846_220 Hb_000329_800--Hb_004846_220 Hb_003159_140 Hb_003159_140 Hb_000329_800--Hb_003159_140 Hb_005000_170 Hb_005000_170 Hb_000329_800--Hb_005000_170 Hb_001301_150--Hb_003883_060 Hb_000138_100 Hb_000138_100 Hb_001301_150--Hb_000138_100 Hb_001876_050 Hb_001876_050 Hb_001301_150--Hb_001876_050 Hb_183510_020 Hb_183510_020 Hb_001301_150--Hb_183510_020 Hb_001040_100--Hb_000035_470 Hb_001040_100--Hb_003159_140 Hb_004020_040 Hb_004020_040 Hb_001040_100--Hb_004020_040 Hb_003438_050 Hb_003438_050 Hb_001040_100--Hb_003438_050 Hb_002681_090 Hb_002681_090 Hb_001040_100--Hb_002681_090 Hb_013726_090 Hb_013726_090 Hb_003883_060--Hb_013726_090 Hb_004705_170 Hb_004705_170 Hb_003883_060--Hb_004705_170 Hb_003883_060--Hb_000976_140 Hb_003581_200 Hb_003581_200 Hb_003883_060--Hb_003581_200 Hb_000167_010 Hb_000167_010 Hb_003883_060--Hb_000167_010 Hb_000640_170--Hb_168978_030 Hb_000640_170--Hb_000035_470 Hb_001599_040 Hb_001599_040 Hb_000640_170--Hb_001599_040 Hb_009898_050 Hb_009898_050 Hb_000640_170--Hb_009898_050 Hb_000156_010 Hb_000156_010 Hb_000640_170--Hb_000156_010 Hb_026198_070 Hb_026198_070 Hb_000640_170--Hb_026198_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.26643 1.71067 2.92065 3.1395 2.2599 2.71869
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.4711 2.7003 1.33238 3.7581 2.67111

CAGE analysis