Hb_004324_110

Information

Type -
Description -
Location Contig4324: 77579-80787
Sequence    

Annotation

kegg
ID rcu:RCOM_1580370
description hypothetical protein
nr
ID XP_012090105.1
description PREDICTED: abscisic acid receptor PYL8 [Jatropha curcas]
swissprot
ID Q9FGM1
description Abscisic acid receptor PYL8 OS=Arabidopsis thaliana GN=PYL8 PE=1 SV=1
trembl
ID A0A067JRL7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25995 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42312: 77598-80770
cDNA
(Sanger)
(ID:Location)		 021_P11.ab1: 77602-80130 , 027_N19.ab1: 77602-80170

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004324_110 0.0 - - PREDICTED: abscisic acid receptor PYL8 [Jatropha curcas]
2 Hb_095296_010 0.0880411823 - - PREDICTED: syntaxin-32 [Jatropha curcas]
3 Hb_006588_210 0.0901997021 - - PREDICTED: E3 ubiquitin-protein ligase Hakai [Jatropha curcas]
4 Hb_005116_060 0.0939329505 - - PREDICTED: mitochondrial Rho GTPase 2 isoform X1 [Jatropha curcas]
5 Hb_000260_180 0.0959265437 - - PREDICTED: KH domain-containing protein At2g38610 [Jatropha curcas]
6 Hb_005288_170 0.0970159871 - - PREDICTED: pentatricopeptide repeat-containing protein At1g08610 [Populus euphratica]
7 Hb_000696_090 0.0973718863 - - PREDICTED: uncharacterized protein LOC105647093 [Jatropha curcas]
8 Hb_007035_050 0.0977293377 - - PREDICTED: cleavage stimulating factor 64 [Jatropha curcas]
9 Hb_000705_170 0.0994647652 - - PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Jatropha curcas]
10 Hb_000868_110 0.1025188834 - - PREDICTED: uncharacterized protein LOC105638026 [Jatropha curcas]
11 Hb_000340_400 0.1035416131 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
12 Hb_000905_210 0.1069435213 - - PREDICTED: protein gar2 [Jatropha curcas]
13 Hb_006478_040 0.1078884902 - - PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial [Jatropha curcas]
14 Hb_001258_020 0.1107417259 - - PREDICTED: protein RMD5 homolog A [Jatropha curcas]
15 Hb_005725_210 0.1141961059 - - PREDICTED: RNA-binding protein 1 [Jatropha curcas]
16 Hb_012779_090 0.1151608101 - - PREDICTED: lipase member N [Jatropha curcas]
17 Hb_000111_180 0.115183261 - - PREDICTED: U-box domain-containing protein 4 [Jatropha curcas]
18 Hb_002553_040 0.1158040275 - - PREDICTED: transcription factor bHLH104 [Jatropha curcas]
19 Hb_000220_040 0.1160566447 - - conserved hypothetical protein [Ricinus communis]
20 Hb_003001_080 0.1162302922 - - PREDICTED: uncharacterized protein LOC105644363 [Jatropha curcas]

Gene co-expression network

sample Hb_004324_110 Hb_004324_110 Hb_095296_010 Hb_095296_010 Hb_004324_110--Hb_095296_010 Hb_006588_210 Hb_006588_210 Hb_004324_110--Hb_006588_210 Hb_005116_060 Hb_005116_060 Hb_004324_110--Hb_005116_060 Hb_000260_180 Hb_000260_180 Hb_004324_110--Hb_000260_180 Hb_005288_170 Hb_005288_170 Hb_004324_110--Hb_005288_170 Hb_000696_090 Hb_000696_090 Hb_004324_110--Hb_000696_090 Hb_000868_110 Hb_000868_110 Hb_095296_010--Hb_000868_110 Hb_002073_200 Hb_002073_200 Hb_095296_010--Hb_002073_200 Hb_095296_010--Hb_005116_060 Hb_003020_270 Hb_003020_270 Hb_095296_010--Hb_003020_270 Hb_006816_350 Hb_006816_350 Hb_095296_010--Hb_006816_350 Hb_000869_080 Hb_000869_080 Hb_095296_010--Hb_000869_080 Hb_006588_210--Hb_000260_180 Hb_001410_020 Hb_001410_020 Hb_006588_210--Hb_001410_020 Hb_000340_400 Hb_000340_400 Hb_006588_210--Hb_000340_400 Hb_004870_050 Hb_004870_050 Hb_006588_210--Hb_004870_050 Hb_000087_060 Hb_000087_060 Hb_006588_210--Hb_000087_060 Hb_006588_210--Hb_002073_200 Hb_005116_060--Hb_000340_400 Hb_007035_050 Hb_007035_050 Hb_005116_060--Hb_007035_050 Hb_006478_040 Hb_006478_040 Hb_005116_060--Hb_006478_040 Hb_001030_020 Hb_001030_020 Hb_005116_060--Hb_001030_020 Hb_003001_080 Hb_003001_080 Hb_005116_060--Hb_003001_080 Hb_000260_180--Hb_001410_020 Hb_012779_090 Hb_012779_090 Hb_000260_180--Hb_012779_090 Hb_162275_050 Hb_162275_050 Hb_000260_180--Hb_162275_050 Hb_005541_010 Hb_005541_010 Hb_000260_180--Hb_005541_010 Hb_000025_730 Hb_000025_730 Hb_000260_180--Hb_000025_730 Hb_000705_170 Hb_000705_170 Hb_005288_170--Hb_000705_170 Hb_000049_260 Hb_000049_260 Hb_005288_170--Hb_000049_260 Hb_004236_050 Hb_004236_050 Hb_005288_170--Hb_004236_050 Hb_000861_080 Hb_000861_080 Hb_005288_170--Hb_000861_080 Hb_003929_280 Hb_003929_280 Hb_005288_170--Hb_003929_280 Hb_000454_130 Hb_000454_130 Hb_005288_170--Hb_000454_130 Hb_003142_030 Hb_003142_030 Hb_000696_090--Hb_003142_030 Hb_152175_010 Hb_152175_010 Hb_000696_090--Hb_152175_010 Hb_000696_090--Hb_095296_010 Hb_000696_090--Hb_003020_270 Hb_012055_060 Hb_012055_060 Hb_000696_090--Hb_012055_060 Hb_000179_070 Hb_000179_070 Hb_000696_090--Hb_000179_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
46.7696 151.014 77.8191 57.6292 88.9277 55.2706
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
76.6341 121.371 60.542 39.5899 54.4695

CAGE analysis