Hb_004341_010

Information

Type -
Description -
Location Contig4341: 49825-57864
Sequence    

Annotation

kegg
ID rcu:RCOM_1096970
description S-locus-specific glycoprotein S6 precursor, putative (EC:2.7.10.2)
nr
ID XP_012091449.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
swissprot
ID O64783
description G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 OS=Arabidopsis thaliana GN=At1g61370 PE=3 SV=2
trembl
ID A0A067JDL7
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_21324 PE=3 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase at1g61370

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004341_010 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
2 Hb_031954_010 0.0537060055 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_004837_170 0.091428456 - - PREDICTED: uncharacterized protein LOC105648284 [Jatropha curcas]
4 Hb_002762_070 0.1055302783 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
5 Hb_000077_460 0.1087685529 - - -
6 Hb_028207_030 0.1102419757 - - PREDICTED: non-specific lipid-transfer protein 8-like [Citrus sinensis]
7 Hb_001283_010 0.1112816147 transcription factor TF Family: LOB LOB domain-containing protein 15 [Populus tremula x Populus tremuloides]
8 Hb_027445_080 0.1143378218 transcription factor TF Family: LOB LOB domain protein 25 [Populus trichocarpa]
9 Hb_001021_140 0.1151011047 transcription factor TF Family: C2H2 PREDICTED: protein indeterminate-domain 2-like [Jatropha curcas]
10 Hb_031862_090 0.1163013458 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like [Jatropha curcas]
11 Hb_000365_290 0.1277933223 - - PREDICTED: protein MTL1-like isoform X1 [Jatropha curcas]
12 Hb_004724_070 0.1331949033 transcription factor TF Family: bZIP PREDICTED: transcription factor TGA2 isoform X1 [Jatropha curcas]
13 Hb_000935_070 0.137906114 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
14 Hb_002282_030 0.1416297582 - - -
15 Hb_005203_010 0.144955631 - - PREDICTED: probable nucleolar protein 5-1 [Jatropha curcas]
16 Hb_017866_020 0.1451794925 transcription factor TF Family: WRKY WRKY transcription factor 40 [Jatropha curcas]
17 Hb_005380_040 0.1465409983 - - hypothetical protein PRUPE_ppa015877mg, partial [Prunus persica]
18 Hb_007850_040 0.1470832686 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000891_060 0.1472318349 - - hypothetical protein JCGZ_11234 [Jatropha curcas]
20 Hb_000616_060 0.1507353237 - - -

Gene co-expression network

sample Hb_004341_010 Hb_004341_010 Hb_031954_010 Hb_031954_010 Hb_004341_010--Hb_031954_010 Hb_004837_170 Hb_004837_170 Hb_004341_010--Hb_004837_170 Hb_002762_070 Hb_002762_070 Hb_004341_010--Hb_002762_070 Hb_000077_460 Hb_000077_460 Hb_004341_010--Hb_000077_460 Hb_028207_030 Hb_028207_030 Hb_004341_010--Hb_028207_030 Hb_001283_010 Hb_001283_010 Hb_004341_010--Hb_001283_010 Hb_031954_010--Hb_001283_010 Hb_031954_010--Hb_002762_070 Hb_031954_010--Hb_028207_030 Hb_031954_010--Hb_000077_460 Hb_031954_010--Hb_004837_170 Hb_027445_080 Hb_027445_080 Hb_004837_170--Hb_027445_080 Hb_004837_170--Hb_002762_070 Hb_004724_070 Hb_004724_070 Hb_004837_170--Hb_004724_070 Hb_002282_030 Hb_002282_030 Hb_004837_170--Hb_002282_030 Hb_002762_070--Hb_027445_080 Hb_000365_290 Hb_000365_290 Hb_002762_070--Hb_000365_290 Hb_017661_020 Hb_017661_020 Hb_002762_070--Hb_017661_020 Hb_002762_070--Hb_028207_030 Hb_031862_090 Hb_031862_090 Hb_002762_070--Hb_031862_090 Hb_000077_460--Hb_028207_030 Hb_017866_020 Hb_017866_020 Hb_000077_460--Hb_017866_020 Hb_000045_180 Hb_000045_180 Hb_000077_460--Hb_000045_180 Hb_000077_460--Hb_001283_010 Hb_013914_020 Hb_013914_020 Hb_000077_460--Hb_013914_020 Hb_002003_020 Hb_002003_020 Hb_000077_460--Hb_002003_020 Hb_028207_030--Hb_031862_090 Hb_028207_030--Hb_027445_080 Hb_004136_050 Hb_004136_050 Hb_001283_010--Hb_004136_050 Hb_001283_010--Hb_017866_020 Hb_001283_010--Hb_002003_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0462842 3.70966 0.0589686 2.10287 0.0174868 0.0717662
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.38972 0

CAGE analysis