Hb_004355_030

Information

Type -
Description -
Location Contig4355: 64582-67088
Sequence    

Annotation

kegg
ID rcu:RCOM_0681980
description fumarylacetoacetate hydrolase, putative (EC:4.1.1.68)
nr
ID XP_002516952.1
description fumarylacetoacetate hydrolase, putative [Ricinus communis]
swissprot
ID Q86I22
description Acylpyruvase FAHD1, mitochondrial OS=Dictyostelium discoideum GN=fahd1 PE=3 SV=1
trembl
ID B9RT83
description Fumarylacetoacetate hydrolase, putative OS=Ricinus communis GN=RCOM_0681980 PE=4 SV=1
Gene Ontology
ID GO:0016787
description acylpyruvase mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42438: 64621-67070
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004355_030 0.0 - - fumarylacetoacetate hydrolase, putative [Ricinus communis]
2 Hb_166236_010 0.1006206077 - - -
3 Hb_002217_510 0.1018869674 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000020_150 0.1025182489 - - PREDICTED: uncharacterized protein LOC105636325 [Jatropha curcas]
5 Hb_002675_260 0.1104749272 - - hypothetical protein JCGZ_06227 [Jatropha curcas]
6 Hb_000221_250 0.1107797676 - - hypothetical protein JCGZ_15814 [Jatropha curcas]
7 Hb_010417_080 0.1163057547 - - PREDICTED: uncharacterized protein LOC105645742 isoform X1 [Jatropha curcas]
8 Hb_000061_470 0.1178977668 - - PREDICTED: LOW QUALITY PROTEIN: DNA annealing helicase and endonuclease ZRANB3 [Jatropha curcas]
9 Hb_007423_040 0.1200592781 - - PREDICTED: polyadenylate-binding protein 2-like isoform X1 [Jatropha curcas]
10 Hb_033834_030 0.1201056846 - - PREDICTED: nucleolar complex protein 2 homolog isoform X1 [Jatropha curcas]
11 Hb_006502_070 0.1215464097 - - separase, putative [Ricinus communis]
12 Hb_030385_010 0.1225627458 - - PREDICTED: zinc-binding alcohol dehydrogenase domain-containing protein 2-like [Jatropha curcas]
13 Hb_000227_090 0.1233912562 - - PREDICTED: NEDD8-activating enzyme E1 catalytic subunit [Jatropha curcas]
14 Hb_001486_160 0.1236029503 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
15 Hb_012114_080 0.1238279764 - - gamma-glutamylcysteine synthetase [Hevea brasiliensis]
16 Hb_004577_020 0.1241614611 - - PREDICTED: MOB kinase activator-like 1 [Jatropha curcas]
17 Hb_008103_070 0.1243209048 transcription factor TF Family: MYB-related PREDICTED: telomere repeat-binding factor 4-like [Jatropha curcas]
18 Hb_011609_080 0.1252144651 - - uv excision repair protein rad23, putative [Ricinus communis]
19 Hb_011249_010 0.1253023472 - - PREDICTED: N-alpha-acetyltransferase 35, NatC auxiliary subunit isoform X1 [Jatropha curcas]
20 Hb_007576_080 0.1255018061 - - PREDICTED: uncharacterized protein LOC105643972 [Jatropha curcas]

Gene co-expression network

sample Hb_004355_030 Hb_004355_030 Hb_166236_010 Hb_166236_010 Hb_004355_030--Hb_166236_010 Hb_002217_510 Hb_002217_510 Hb_004355_030--Hb_002217_510 Hb_000020_150 Hb_000020_150 Hb_004355_030--Hb_000020_150 Hb_002675_260 Hb_002675_260 Hb_004355_030--Hb_002675_260 Hb_000221_250 Hb_000221_250 Hb_004355_030--Hb_000221_250 Hb_010417_080 Hb_010417_080 Hb_004355_030--Hb_010417_080 Hb_006502_070 Hb_006502_070 Hb_166236_010--Hb_006502_070 Hb_011218_040 Hb_011218_040 Hb_166236_010--Hb_011218_040 Hb_166236_010--Hb_010417_080 Hb_009767_100 Hb_009767_100 Hb_166236_010--Hb_009767_100 Hb_006788_020 Hb_006788_020 Hb_166236_010--Hb_006788_020 Hb_000111_210 Hb_000111_210 Hb_002217_510--Hb_000111_210 Hb_007423_040 Hb_007423_040 Hb_002217_510--Hb_007423_040 Hb_000227_090 Hb_000227_090 Hb_002217_510--Hb_000227_090 Hb_011909_120 Hb_011909_120 Hb_002217_510--Hb_011909_120 Hb_008103_070 Hb_008103_070 Hb_002217_510--Hb_008103_070 Hb_000563_230 Hb_000563_230 Hb_002217_510--Hb_000563_230 Hb_028872_090 Hb_028872_090 Hb_000020_150--Hb_028872_090 Hb_000120_430 Hb_000120_430 Hb_000020_150--Hb_000120_430 Hb_063716_100 Hb_063716_100 Hb_000020_150--Hb_063716_100 Hb_000020_150--Hb_000221_250 Hb_033834_030 Hb_033834_030 Hb_000020_150--Hb_033834_030 Hb_183612_040 Hb_183612_040 Hb_000020_150--Hb_183612_040 Hb_000207_130 Hb_000207_130 Hb_002675_260--Hb_000207_130 Hb_005137_050 Hb_005137_050 Hb_002675_260--Hb_005137_050 Hb_003687_230 Hb_003687_230 Hb_002675_260--Hb_003687_230 Hb_003078_040 Hb_003078_040 Hb_002675_260--Hb_003078_040 Hb_007632_110 Hb_007632_110 Hb_002675_260--Hb_007632_110 Hb_000771_180 Hb_000771_180 Hb_002675_260--Hb_000771_180 Hb_003097_170 Hb_003097_170 Hb_000221_250--Hb_003097_170 Hb_011716_070 Hb_011716_070 Hb_000221_250--Hb_011716_070 Hb_001860_030 Hb_001860_030 Hb_000221_250--Hb_001860_030 Hb_004046_050 Hb_004046_050 Hb_000221_250--Hb_004046_050 Hb_007123_030 Hb_007123_030 Hb_000221_250--Hb_007123_030 Hb_004577_020 Hb_004577_020 Hb_010417_080--Hb_004577_020 Hb_001221_100 Hb_001221_100 Hb_010417_080--Hb_001221_100 Hb_005064_060 Hb_005064_060 Hb_010417_080--Hb_005064_060 Hb_010417_080--Hb_004046_050 Hb_010417_080--Hb_011218_040 Hb_039946_020 Hb_039946_020 Hb_010417_080--Hb_039946_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
102.935 74.3149 73.7741 49.7769 85.4041 53.564
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
105.909 67.247 36.9602 99.6754 22.4516

CAGE analysis