Hb_004375_130

Information

Type -
Description -
Location Contig4375: 101751-107675
Sequence    

Annotation

kegg
ID rcu:RCOM_1179790
description kinesin heavy chain, putative
nr
ID XP_002523135.1
description kinesin heavy chain, putative [Ricinus communis]
swissprot
ID O81635
description Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2
trembl
ID B9SAW6
description Kinesin-like protein OS=Ricinus communis GN=RCOM_1179790 PE=3 SV=1
Gene Ontology
ID GO:0005871
description kinesin heavy

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42535: 101941-107793 , PASA_asmbl_42536: 107106-107292
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004375_130 0.0 - - kinesin heavy chain, putative [Ricinus communis]
2 Hb_000554_010 0.11011215 - - transporter, putative [Ricinus communis]
3 Hb_003376_050 0.1125625915 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
4 Hb_002769_020 0.1285196831 - - DNA-damage-inducible protein f, putative [Ricinus communis]
5 Hb_000096_080 0.13750117 - - PREDICTED: putative glycosyltransferase 7 [Jatropha curcas]
6 Hb_000392_370 0.1380432598 - - PREDICTED: protein IQ-DOMAIN 31-like [Jatropha curcas]
7 Hb_004705_040 0.138805725 - - PREDICTED: coiled-coil domain-containing protein SCD2 [Jatropha curcas]
8 Hb_002078_160 0.1390305038 - - PREDICTED: probable arabinosyltransferase ARAD1 [Jatropha curcas]
9 Hb_001141_410 0.1399022937 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
10 Hb_000649_050 0.1408456094 - - PREDICTED: microtubule-associated protein 70-2-like isoform X1 [Jatropha curcas]
11 Hb_182516_010 0.1453941326 - - PREDICTED: uncharacterized protein LOC105641595 [Jatropha curcas]
12 Hb_004007_160 0.1489284595 - - PREDICTED: formin-like protein 6 [Jatropha curcas]
13 Hb_004223_190 0.1496886251 - - PREDICTED: filament-like plant protein 4 [Jatropha curcas]
14 Hb_000197_210 0.1505074439 - - phosphatidylinositol transporter, putative [Ricinus communis]
15 Hb_000025_090 0.1524183064 - - tubulin beta chain, putative [Ricinus communis]
16 Hb_000281_110 0.1529558534 - - PREDICTED: pumilio homolog 12 [Jatropha curcas]
17 Hb_002559_040 0.1572502125 transcription factor TF Family: TUB PREDICTED: tubby-like F-box protein 5 isoform X2 [Jatropha curcas]
18 Hb_001396_280 0.1573815006 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 2 [Jatropha curcas]
19 Hb_045770_010 0.16015397 - - ER lumen protein retaining receptor [Populus trichocarpa]
20 Hb_009049_020 0.1602160022 - - PREDICTED: 2-dehydro-3-deoxyphosphooctonate aldolase 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_004375_130 Hb_004375_130 Hb_000554_010 Hb_000554_010 Hb_004375_130--Hb_000554_010 Hb_003376_050 Hb_003376_050 Hb_004375_130--Hb_003376_050 Hb_002769_020 Hb_002769_020 Hb_004375_130--Hb_002769_020 Hb_000096_080 Hb_000096_080 Hb_004375_130--Hb_000096_080 Hb_000392_370 Hb_000392_370 Hb_004375_130--Hb_000392_370 Hb_004705_040 Hb_004705_040 Hb_004375_130--Hb_004705_040 Hb_004007_160 Hb_004007_160 Hb_000554_010--Hb_004007_160 Hb_000554_010--Hb_004705_040 Hb_000281_110 Hb_000281_110 Hb_000554_010--Hb_000281_110 Hb_007479_050 Hb_007479_050 Hb_000554_010--Hb_007479_050 Hb_000649_050 Hb_000649_050 Hb_000554_010--Hb_000649_050 Hb_002942_060 Hb_002942_060 Hb_003376_050--Hb_002942_060 Hb_000797_050 Hb_000797_050 Hb_003376_050--Hb_000797_050 Hb_000606_080 Hb_000606_080 Hb_003376_050--Hb_000606_080 Hb_003376_050--Hb_000649_050 Hb_000197_210 Hb_000197_210 Hb_003376_050--Hb_000197_210 Hb_000700_150 Hb_000700_150 Hb_002769_020--Hb_000700_150 Hb_001141_410 Hb_001141_410 Hb_002769_020--Hb_001141_410 Hb_000203_230 Hb_000203_230 Hb_002769_020--Hb_000203_230 Hb_000920_030 Hb_000920_030 Hb_002769_020--Hb_000920_030 Hb_003462_070 Hb_003462_070 Hb_002769_020--Hb_003462_070 Hb_000175_590 Hb_000175_590 Hb_002769_020--Hb_000175_590 Hb_000556_150 Hb_000556_150 Hb_000096_080--Hb_000556_150 Hb_000207_100 Hb_000207_100 Hb_000096_080--Hb_000207_100 Hb_002078_160 Hb_002078_160 Hb_000096_080--Hb_002078_160 Hb_007904_210 Hb_007904_210 Hb_000096_080--Hb_007904_210 Hb_000096_080--Hb_000554_010 Hb_017295_010 Hb_017295_010 Hb_000392_370--Hb_017295_010 Hb_002750_050 Hb_002750_050 Hb_000392_370--Hb_002750_050 Hb_058999_030 Hb_058999_030 Hb_000392_370--Hb_058999_030 Hb_001584_370 Hb_001584_370 Hb_000392_370--Hb_001584_370 Hb_003430_090 Hb_003430_090 Hb_000392_370--Hb_003430_090 Hb_001396_280 Hb_001396_280 Hb_000392_370--Hb_001396_280 Hb_004705_040--Hb_004007_160 Hb_000299_040 Hb_000299_040 Hb_004705_040--Hb_000299_040 Hb_000956_130 Hb_000956_130 Hb_004705_040--Hb_000956_130 Hb_004705_040--Hb_000649_050 Hb_004705_040--Hb_007479_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
43.6229 5.435 22.7313 46.5633 36.1331 43.6942
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
32.3429 9.59607 17.1365 4.95367 24.9181

CAGE analysis