Hb_004410_060

Information

Type -
Description -
Location Contig4410: 50476-52776
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID A0A067KUC6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04513 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004410_060 0.0 - - -
2 Hb_124976_010 0.0202147427 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
3 Hb_019859_030 0.0273125883 - - hypothetical protein MIMGU_mgv1a018902mg [Erythranthe guttata]
4 Hb_007139_010 0.0276010688 - - hypothetical protein POPTR_0016s134801g, partial [Populus trichocarpa]
5 Hb_012815_020 0.0283317958 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
6 Hb_007545_160 0.0358099938 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
7 Hb_000078_040 0.0423340211 - - PREDICTED: uncharacterized protein LOC104907366 [Beta vulgaris subsp. vulgaris]
8 Hb_022348_020 0.0616998791 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
9 Hb_003581_040 0.0638055885 - - hypothetical protein PHAVU_002G080900g [Phaseolus vulgaris]
10 Hb_002871_200 0.0648724693 - - -
11 Hb_043950_010 0.079727077 - - PREDICTED: uncharacterized protein LOC102619199, partial [Citrus sinensis]
12 Hb_078466_020 0.0911715327 - - PREDICTED: uncharacterized protein LOC105644346 [Jatropha curcas]
13 Hb_080147_010 0.1233549484 - - -
14 Hb_006183_010 0.1244910792 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
15 Hb_012733_080 0.125288793 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
16 Hb_011362_030 0.1336833136 - - polyprotein [Oryza australiensis]
17 Hb_000580_040 0.142532331 - - -
18 Hb_002800_040 0.172582506 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
19 Hb_004162_110 0.1729595994 - - hypothetical protein JCGZ_05404 [Jatropha curcas]
20 Hb_000243_100 0.1729891826 - - Purple acid phosphatase precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_004410_060 Hb_004410_060 Hb_124976_010 Hb_124976_010 Hb_004410_060--Hb_124976_010 Hb_019859_030 Hb_019859_030 Hb_004410_060--Hb_019859_030 Hb_007139_010 Hb_007139_010 Hb_004410_060--Hb_007139_010 Hb_012815_020 Hb_012815_020 Hb_004410_060--Hb_012815_020 Hb_007545_160 Hb_007545_160 Hb_004410_060--Hb_007545_160 Hb_000078_040 Hb_000078_040 Hb_004410_060--Hb_000078_040 Hb_124976_010--Hb_019859_030 Hb_124976_010--Hb_007139_010 Hb_124976_010--Hb_012815_020 Hb_124976_010--Hb_000078_040 Hb_022348_020 Hb_022348_020 Hb_124976_010--Hb_022348_020 Hb_019859_030--Hb_007139_010 Hb_019859_030--Hb_012815_020 Hb_019859_030--Hb_000078_040 Hb_019859_030--Hb_022348_020 Hb_007139_010--Hb_012815_020 Hb_007139_010--Hb_000078_040 Hb_007139_010--Hb_022348_020 Hb_012815_020--Hb_000078_040 Hb_012815_020--Hb_022348_020 Hb_043950_010 Hb_043950_010 Hb_007545_160--Hb_043950_010 Hb_007545_160--Hb_124976_010 Hb_007545_160--Hb_019859_030 Hb_007545_160--Hb_007139_010 Hb_007545_160--Hb_012815_020 Hb_000078_040--Hb_022348_020 Hb_003581_040 Hb_003581_040 Hb_000078_040--Hb_003581_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.156779 0 0 0 0.317332
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis