Hb_004411_010

Information

Type -
Description -
Location Contig4411: 12317-15012
Sequence    

Annotation

kegg
ID egr:104435513
description 2-alkenal reductase (NADP(+)-dependent)-like
nr
ID XP_012481401.1
description PREDICTED: NADP-dependent alkenal double bond reductase P2-like isoform X5 [Gossypium raimondii]
swissprot
ID Q8N4Q0
description Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Homo sapiens GN=ZADH2 PE=1 SV=1
trembl
ID A0A0D2S933
description Gossypium raimondii chromosome 5, whole genome shotgun sequence OS=Gossypium raimondii GN=B456_005G006800 PE=4 SV=1
Gene Ontology
ID GO:0008270
description 2-alkenal reductase (nadp(+)-dependent)-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42676: 12442-15259
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004411_010 0.0 - - PREDICTED: NADP-dependent alkenal double bond reductase P2-like isoform X5 [Gossypium raimondii]
2 Hb_000069_220 0.0427267034 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF023 [Jatropha curcas]
3 Hb_000069_440 0.0479506778 - - PREDICTED: uncharacterized protein LOC105642861 [Jatropha curcas]
4 Hb_000697_030 0.0488128137 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like [Pyrus x bretschneideri]
5 Hb_016371_010 0.052377582 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
6 Hb_000282_020 0.0584345731 transcription factor TF Family: MYB-related conserved hypothetical protein [Ricinus communis]
7 Hb_007853_030 0.0633221547 - - structural molecule, putative [Ricinus communis]
8 Hb_000530_040 0.0653293454 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG2 isoform X1 [Jatropha curcas]
9 Hb_001424_010 0.0705259447 - - serine/threonine protein kinase, putative [Ricinus communis]
10 Hb_179129_010 0.0711532476 - - hypothetical protein POPTR_0018s10470g [Populus trichocarpa]
11 Hb_000087_040 0.0733382446 - - Autoinhibited Ca(2+)-ATPase 10 isoform 1 [Theobroma cacao]
12 Hb_003573_030 0.0746158667 - - PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
13 Hb_004346_050 0.0756163279 - - PREDICTED: ABC transporter G family member 22 [Jatropha curcas]
14 Hb_048141_050 0.0759187349 - - hypothetical protein PRUPE_ppa009153mg [Prunus persica]
15 Hb_007681_010 0.0765759855 - - hypothetical protein RCOM_2128750 [Ricinus communis]
16 Hb_000005_060 0.0769796951 - - PREDICTED: uncharacterized protein At1g08160 [Jatropha curcas]
17 Hb_001975_120 0.0792166281 - - chlorophyll a/b binding protein type II [Glycine max]
18 Hb_003038_230 0.0795489453 - - PREDICTED: mannan endo-1,4-beta-mannosidase 7 [Jatropha curcas]
19 Hb_001266_010 0.0801495243 - - PREDICTED: uncharacterized protein LOC101206474 [Cucumis sativus]
20 Hb_023827_030 0.0806663378 - - PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic-like [Populus euphratica]

Gene co-expression network

sample Hb_004411_010 Hb_004411_010 Hb_000069_220 Hb_000069_220 Hb_004411_010--Hb_000069_220 Hb_000069_440 Hb_000069_440 Hb_004411_010--Hb_000069_440 Hb_000697_030 Hb_000697_030 Hb_004411_010--Hb_000697_030 Hb_016371_010 Hb_016371_010 Hb_004411_010--Hb_016371_010 Hb_000282_020 Hb_000282_020 Hb_004411_010--Hb_000282_020 Hb_007853_030 Hb_007853_030 Hb_004411_010--Hb_007853_030 Hb_000069_220--Hb_000697_030 Hb_003573_030 Hb_003573_030 Hb_000069_220--Hb_003573_030 Hb_000069_220--Hb_007853_030 Hb_000530_040 Hb_000530_040 Hb_000069_220--Hb_000530_040 Hb_000210_030 Hb_000210_030 Hb_000069_220--Hb_000210_030 Hb_000069_440--Hb_000282_020 Hb_000069_440--Hb_007853_030 Hb_023827_030 Hb_023827_030 Hb_000069_440--Hb_023827_030 Hb_000069_440--Hb_000069_220 Hb_001266_010 Hb_001266_010 Hb_000069_440--Hb_001266_010 Hb_000697_030--Hb_003573_030 Hb_000697_030--Hb_000530_040 Hb_001424_010 Hb_001424_010 Hb_000697_030--Hb_001424_010 Hb_001975_120 Hb_001975_120 Hb_000697_030--Hb_001975_120 Hb_004346_050 Hb_004346_050 Hb_016371_010--Hb_004346_050 Hb_179129_010 Hb_179129_010 Hb_016371_010--Hb_179129_010 Hb_016371_010--Hb_001424_010 Hb_016371_010--Hb_000697_030 Hb_078954_030 Hb_078954_030 Hb_016371_010--Hb_078954_030 Hb_019053_040 Hb_019053_040 Hb_000282_020--Hb_019053_040 Hb_000005_060 Hb_000005_060 Hb_000282_020--Hb_000005_060 Hb_023582_010 Hb_023582_010 Hb_000282_020--Hb_023582_010 Hb_000282_020--Hb_023827_030 Hb_007681_010 Hb_007681_010 Hb_007853_030--Hb_007681_010 Hb_001166_010 Hb_001166_010 Hb_007853_030--Hb_001166_010 Hb_002042_090 Hb_002042_090 Hb_007853_030--Hb_002042_090 Hb_000172_660 Hb_000172_660 Hb_007853_030--Hb_000172_660
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.37837 33.0636 10.9568 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 21.74

CAGE analysis