Hb_004411_050

Information

Type -
Description -
Location Contig4411: 74655-77108
Sequence    

Annotation

kegg
ID csv:101222067
description NADP-dependent alkenal double bond reductase P2-like
nr
ID CAC01711.1
description quinone oxidoreductase-like protein [Arabidopsis thaliana]
swissprot
ID -
description -
trembl
ID Q9LFK4
description Quinone oxidoreductase-like protein OS=Arabidopsis thaliana GN=F2K13_130 PE=4 SV=1
Gene Ontology
ID GO:0008270
description 2-alkenal reductase (nadp(+)-dependent)-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004411_050 0.0 - - quinone oxidoreductase-like protein [Arabidopsis thaliana]
2 Hb_005486_020 0.1329669142 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT5 [Jatropha curcas]
3 Hb_000990_040 0.1353471664 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 7 [Jatropha curcas]
4 Hb_003777_120 0.1404329846 - - -
5 Hb_006789_030 0.1433552138 - - PREDICTED: wall-associated receptor kinase-like 22 [Prunus mume]
6 Hb_029095_010 0.1477744866 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21060 [Jatropha curcas]
7 Hb_002596_090 0.1507253569 - - PREDICTED: calcium-transporting ATPase 4, plasma membrane-type-like isoform X1 [Jatropha curcas]
8 Hb_003643_050 0.1519679971 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Fragaria vesca subsp. vesca]
9 Hb_074966_010 0.1533094622 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
10 Hb_000152_410 0.1538102124 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
11 Hb_003029_010 0.1583607828 transcription factor TF Family: WRKY conserved hypothetical protein [Ricinus communis]
12 Hb_028487_040 0.1585023326 - - hypothetical protein POPTR_0010s11910g [Populus trichocarpa]
13 Hb_093364_010 0.1588960196 - - PREDICTED: uncharacterized protein LOC105636199 [Jatropha curcas]
14 Hb_001926_020 0.1595290222 - - PREDICTED: glutamate receptor 2.9-like [Jatropha curcas]
15 Hb_011794_050 0.16161765 - - transcription factor, putative [Ricinus communis]
16 Hb_005888_050 0.1618780421 - - ATP binding protein, putative [Ricinus communis]
17 Hb_000199_040 0.1629132012 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
18 Hb_031685_010 0.1630616276 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
19 Hb_003125_080 0.1633833754 - - PREDICTED: F-box protein At5g50450 [Jatropha curcas]
20 Hb_000002_370 0.1640368899 - - PREDICTED: uncharacterized protein LOC105632103 [Jatropha curcas]

Gene co-expression network

sample Hb_004411_050 Hb_004411_050 Hb_005486_020 Hb_005486_020 Hb_004411_050--Hb_005486_020 Hb_000990_040 Hb_000990_040 Hb_004411_050--Hb_000990_040 Hb_003777_120 Hb_003777_120 Hb_004411_050--Hb_003777_120 Hb_006789_030 Hb_006789_030 Hb_004411_050--Hb_006789_030 Hb_029095_010 Hb_029095_010 Hb_004411_050--Hb_029095_010 Hb_002596_090 Hb_002596_090 Hb_004411_050--Hb_002596_090 Hb_005486_020--Hb_000990_040 Hb_005486_020--Hb_029095_010 Hb_001352_030 Hb_001352_030 Hb_005486_020--Hb_001352_030 Hb_005486_020--Hb_002596_090 Hb_093364_010 Hb_093364_010 Hb_005486_020--Hb_093364_010 Hb_111997_010 Hb_111997_010 Hb_005486_020--Hb_111997_010 Hb_000990_040--Hb_093364_010 Hb_004611_050 Hb_004611_050 Hb_000990_040--Hb_004611_050 Hb_000990_040--Hb_029095_010 Hb_000185_170 Hb_000185_170 Hb_000990_040--Hb_000185_170 Hb_007894_120 Hb_007894_120 Hb_000990_040--Hb_007894_120 Hb_074966_010 Hb_074966_010 Hb_003777_120--Hb_074966_010 Hb_001926_020 Hb_001926_020 Hb_003777_120--Hb_001926_020 Hb_032731_010 Hb_032731_010 Hb_003777_120--Hb_032731_010 Hb_059318_010 Hb_059318_010 Hb_003777_120--Hb_059318_010 Hb_000199_040 Hb_000199_040 Hb_003777_120--Hb_000199_040 Hb_000002_370 Hb_000002_370 Hb_003777_120--Hb_000002_370 Hb_031685_010 Hb_031685_010 Hb_006789_030--Hb_031685_010 Hb_010407_150 Hb_010407_150 Hb_006789_030--Hb_010407_150 Hb_006789_030--Hb_029095_010 Hb_001544_060 Hb_001544_060 Hb_006789_030--Hb_001544_060 Hb_034585_070 Hb_034585_070 Hb_006789_030--Hb_034585_070 Hb_001898_100 Hb_001898_100 Hb_006789_030--Hb_001898_100 Hb_029095_010--Hb_093364_010 Hb_029095_010--Hb_002596_090 Hb_029095_010--Hb_031685_010 Hb_029095_010--Hb_004611_050 Hb_003029_010 Hb_003029_010 Hb_002596_090--Hb_003029_010 Hb_028487_040 Hb_028487_040 Hb_002596_090--Hb_028487_040 Hb_000152_410 Hb_000152_410 Hb_002596_090--Hb_000152_410 Hb_029584_110 Hb_029584_110 Hb_002596_090--Hb_029584_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.234783 0.560475 0.166178 0.0374479 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0696281 0.214655

CAGE analysis