Hb_004474_020

Information

Type -
Description -
Location Contig4474: 17930-27408
Sequence    

Annotation

kegg
ID rcu:RCOM_0777680
description aldo-keto reductase, putative (EC:2.3.1.170)
nr
ID XP_002521902.1
description aldo-keto reductase, putative [Ricinus communis]
swissprot
ID Q7G764
description Probable NAD(P)H-dependent oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os10g0113000 PE=1 SV=1
trembl
ID B9S7D3
description Aldo-keto reductase, putative OS=Ricinus communis GN=RCOM_0777680 PE=4 SV=1
Gene Ontology
ID GO:0016740
description non-functional nadph-dependent codeinone reductase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004474_020 0.0 - - aldo-keto reductase, putative [Ricinus communis]
2 Hb_004899_380 0.0670074903 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000224_020 0.0814824419 - - PREDICTED: uncharacterized protein LOC105640888 [Jatropha curcas]
4 Hb_034310_020 0.0898999852 - - PREDICTED: proline-rich receptor-like protein kinase PERK3 [Jatropha curcas]
5 Hb_048987_020 0.0970438182 - - hypothetical protein JCGZ_27055 [Jatropha curcas]
6 Hb_003777_150 0.0999701344 - - PREDICTED: uncharacterized protein LOC105640938 isoform X1 [Jatropha curcas]
7 Hb_008406_050 0.1056635154 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 2 [Jatropha curcas]
8 Hb_033772_040 0.1085775221 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000628_060 0.1142909149 - - PREDICTED: calmodulin-like protein 5 [Solanum lycopersicum]
10 Hb_010080_040 0.1171089692 - - conserved hypothetical protein [Ricinus communis]
11 Hb_174829_030 0.123046038 - - conserved hypothetical protein [Ricinus communis]
12 Hb_081228_010 0.1233750291 - - SENESCENCE-RELATED GENE 1 family protein [Populus trichocarpa]
13 Hb_000696_120 0.123651136 - - PREDICTED: protein FD [Populus euphratica]
14 Hb_002894_020 0.1270436338 - - PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Jatropha curcas]
15 Hb_000224_050 0.1271222532 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001006_080 0.128823344 - - hypothetical protein JCGZ_04862 [Jatropha curcas]
17 Hb_003216_010 0.1288735263 - - glycosyl hydrolase family protein [Populus trichocarpa]
18 Hb_069384_010 0.1302851559 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA27-like isoform X1 [Jatropha curcas]
19 Hb_003561_020 0.1303621627 - - gulonolactone oxidase, putative [Ricinus communis]
20 Hb_010926_020 0.1307597973 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Camelina sativa]

Gene co-expression network

sample Hb_004474_020 Hb_004474_020 Hb_004899_380 Hb_004899_380 Hb_004474_020--Hb_004899_380 Hb_000224_020 Hb_000224_020 Hb_004474_020--Hb_000224_020 Hb_034310_020 Hb_034310_020 Hb_004474_020--Hb_034310_020 Hb_048987_020 Hb_048987_020 Hb_004474_020--Hb_048987_020 Hb_003777_150 Hb_003777_150 Hb_004474_020--Hb_003777_150 Hb_008406_050 Hb_008406_050 Hb_004474_020--Hb_008406_050 Hb_004899_380--Hb_048987_020 Hb_004899_380--Hb_000224_020 Hb_001006_080 Hb_001006_080 Hb_004899_380--Hb_001006_080 Hb_000696_120 Hb_000696_120 Hb_004899_380--Hb_000696_120 Hb_004899_380--Hb_034310_020 Hb_002894_020 Hb_002894_020 Hb_000224_020--Hb_002894_020 Hb_000224_050 Hb_000224_050 Hb_000224_020--Hb_000224_050 Hb_000917_220 Hb_000917_220 Hb_000224_020--Hb_000917_220 Hb_174829_030 Hb_174829_030 Hb_000224_020--Hb_174829_030 Hb_033772_040 Hb_033772_040 Hb_034310_020--Hb_033772_040 Hb_004319_100 Hb_004319_100 Hb_034310_020--Hb_004319_100 Hb_034310_020--Hb_008406_050 Hb_034310_020--Hb_048987_020 Hb_087314_010 Hb_087314_010 Hb_048987_020--Hb_087314_010 Hb_003878_130 Hb_003878_130 Hb_048987_020--Hb_003878_130 Hb_180695_010 Hb_180695_010 Hb_048987_020--Hb_180695_010 Hb_084304_010 Hb_084304_010 Hb_003777_150--Hb_084304_010 Hb_003427_070 Hb_003427_070 Hb_003777_150--Hb_003427_070 Hb_000628_060 Hb_000628_060 Hb_003777_150--Hb_000628_060 Hb_004970_100 Hb_004970_100 Hb_003777_150--Hb_004970_100 Hb_069384_010 Hb_069384_010 Hb_003777_150--Hb_069384_010 Hb_008406_050--Hb_004899_380 Hb_008406_050--Hb_048987_020 Hb_008406_050--Hb_033772_040 Hb_008406_050--Hb_000224_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.97848 5.40506 26.2301 0.0365942 0.0346446
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.839936 0.138855

CAGE analysis