Hb_004531_150

Information

Type -
Description -
Location Contig4531: 98103-103440
Sequence    

Annotation

kegg
ID vvi:100246296
description peroxisome biogenesis protein 2
nr
ID XP_012073394.1
description PREDICTED: peroxisome biogenesis protein 2 isoform X1 [Jatropha curcas]
swissprot
ID Q9CA86
description Peroxisome biogenesis protein 2 OS=Arabidopsis thaliana GN=PEX2 PE=1 SV=1
trembl
ID A0A067KQM3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06319 PE=4 SV=1
Gene Ontology
ID GO:0005515
description peroxisome biogenesis protein 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43317: 98216-99472
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004531_150 0.0 - - PREDICTED: peroxisome biogenesis protein 2 isoform X1 [Jatropha curcas]
2 Hb_001504_010 0.0754313035 - - PREDICTED: uncharacterized protein LOC105645377 [Jatropha curcas]
3 Hb_005305_100 0.0784306557 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Jatropha curcas]
4 Hb_003506_030 0.0793584179 - - PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X2 [Jatropha curcas]
5 Hb_006261_050 0.0815830731 transcription factor TF Family: C2C2-YABBY DNA-binding protein MNB1B, putative [Ricinus communis]
6 Hb_001541_150 0.081688905 - - conserved hypothetical protein [Ricinus communis]
7 Hb_021596_020 0.0819821656 - - hypothetical protein JCGZ_02034 [Jatropha curcas]
8 Hb_002045_170 0.08482915 - - interferon-induced guanylate-binding protein, putative [Ricinus communis]
9 Hb_000258_420 0.0854484746 - - sucrose transporter 2A [Hevea brasiliensis]
10 Hb_003777_030 0.0859313273 - - Exocyst complex component, putative [Ricinus communis]
11 Hb_000788_030 0.0865704299 - - PREDICTED: dynamin-2A [Jatropha curcas]
12 Hb_087313_010 0.087120008 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001635_110 0.0877607823 - - PREDICTED: NADP-specific glutamate dehydrogenase [Jatropha curcas]
14 Hb_000731_200 0.0888801652 - - PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Jatropha curcas]
15 Hb_000476_060 0.0903735998 - - Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 [Theobroma cacao]
16 Hb_000089_210 0.0910739272 - - unknown [Medicago truncatula]
17 Hb_000680_120 0.0914248273 - - PREDICTED: uncharacterized protein LOC105631461 [Jatropha curcas]
18 Hb_003058_140 0.09148807 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003098_070 0.092282022 - - PREDICTED: uncharacterized protein LOC105633456 [Jatropha curcas]
20 Hb_004531_100 0.0924492904 - - PREDICTED: zinc phosphodiesterase ELAC protein 2 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_004531_150 Hb_004531_150 Hb_001504_010 Hb_001504_010 Hb_004531_150--Hb_001504_010 Hb_005305_100 Hb_005305_100 Hb_004531_150--Hb_005305_100 Hb_003506_030 Hb_003506_030 Hb_004531_150--Hb_003506_030 Hb_006261_050 Hb_006261_050 Hb_004531_150--Hb_006261_050 Hb_001541_150 Hb_001541_150 Hb_004531_150--Hb_001541_150 Hb_021596_020 Hb_021596_020 Hb_004531_150--Hb_021596_020 Hb_007483_070 Hb_007483_070 Hb_001504_010--Hb_007483_070 Hb_001504_010--Hb_021596_020 Hb_000163_260 Hb_000163_260 Hb_001504_010--Hb_000163_260 Hb_000579_080 Hb_000579_080 Hb_001504_010--Hb_000579_080 Hb_008304_020 Hb_008304_020 Hb_001504_010--Hb_008304_020 Hb_000815_300 Hb_000815_300 Hb_001504_010--Hb_000815_300 Hb_000956_040 Hb_000956_040 Hb_005305_100--Hb_000956_040 Hb_000300_030 Hb_000300_030 Hb_005305_100--Hb_000300_030 Hb_000172_360 Hb_000172_360 Hb_005305_100--Hb_000172_360 Hb_008165_020 Hb_008165_020 Hb_005305_100--Hb_008165_020 Hb_000179_190 Hb_000179_190 Hb_005305_100--Hb_000179_190 Hb_000110_350 Hb_000110_350 Hb_005305_100--Hb_000110_350 Hb_016448_010 Hb_016448_010 Hb_003506_030--Hb_016448_010 Hb_000089_210 Hb_000089_210 Hb_003506_030--Hb_000089_210 Hb_029695_080 Hb_029695_080 Hb_003506_030--Hb_029695_080 Hb_087313_010 Hb_087313_010 Hb_003506_030--Hb_087313_010 Hb_000958_080 Hb_000958_080 Hb_003506_030--Hb_000958_080 Hb_006261_050--Hb_001541_150 Hb_004531_100 Hb_004531_100 Hb_006261_050--Hb_004531_100 Hb_000731_200 Hb_000731_200 Hb_006261_050--Hb_000731_200 Hb_007597_010 Hb_007597_010 Hb_006261_050--Hb_007597_010 Hb_000069_610 Hb_000069_610 Hb_006261_050--Hb_000069_610 Hb_001541_150--Hb_000300_030 Hb_001541_150--Hb_004531_100 Hb_006663_060 Hb_006663_060 Hb_001541_150--Hb_006663_060 Hb_000270_190 Hb_000270_190 Hb_001541_150--Hb_000270_190 Hb_022250_010 Hb_022250_010 Hb_001541_150--Hb_022250_010 Hb_000336_020 Hb_000336_020 Hb_001541_150--Hb_000336_020 Hb_002684_020 Hb_002684_020 Hb_021596_020--Hb_002684_020 Hb_021596_020--Hb_016448_010 Hb_000748_090 Hb_000748_090 Hb_021596_020--Hb_000748_090 Hb_006438_020 Hb_006438_020 Hb_021596_020--Hb_006438_020 Hb_012633_050 Hb_012633_050 Hb_021596_020--Hb_012633_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.79454 7.22083 10.5643 9.86587 3.21453 3.81786
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.12715 4.5201 2.5781 5.18282 8.03192

CAGE analysis