Hb_004534_020

Information

Type -
Description -
Location Contig4534: 5733-6146
Sequence    

Annotation

kegg
ID tcc:TCM_020180
description Cystatin
nr
ID XP_012078437.1
description PREDICTED: cysteine proteinase inhibitor B [Jatropha curcas]
swissprot
ID P0C579
description Cysteine proteinase inhibitor 10 OS=Oryza sativa subsp. japonica GN=Os04g0350100 PE=2 SV=1
trembl
ID A0A067K8L1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13126 PE=4 SV=1
Gene Ontology
ID GO:0030414
description cysteine proteinase inhibitor b

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004534_020 0.0 - - PREDICTED: cysteine proteinase inhibitor B [Jatropha curcas]
2 Hb_003859_010 0.1899624819 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
3 Hb_137543_010 0.2138922436 - - -
4 Hb_007382_040 0.2183018715 - - uncharacterized LOC105644857 [Jatropha curcas]
5 Hb_001565_100 0.2270160294 - - unnamed protein product [Coffea canephora]
6 Hb_002609_100 0.2329857671 - - PREDICTED: uncharacterized protein LOC105133073 isoform X1 [Populus euphratica]
7 Hb_166786_030 0.2347748854 - - PREDICTED: uncharacterized protein LOC105775425 [Gossypium raimondii]
8 Hb_000214_090 0.2403132621 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
9 Hb_000613_020 0.2407976766 - - PREDICTED: U-box domain-containing protein 15 [Jatropha curcas]
10 Hb_074683_020 0.2412983163 - - PREDICTED: 60S ribosomal protein L27-3 [Jatropha curcas]
11 Hb_012518_060 0.2425687765 - - -
12 Hb_001259_030 0.2461386012 - - PREDICTED: uncharacterized protein LOC105641270 [Jatropha curcas]
13 Hb_024828_040 0.2486544984 - - -
14 Hb_000014_130 0.2542778881 - - PREDICTED: uncharacterized protein LOC104219776 [Nicotiana sylvestris]
15 Hb_002007_290 0.2587780483 - - -
16 Hb_005217_020 0.2613607832 - - PREDICTED: ribosomal RNA processing protein 36 homolog isoform X2 [Jatropha curcas]
17 Hb_007904_190 0.2620691586 - - -
18 Hb_006588_090 0.2624571168 - - PREDICTED: uncharacterized protein At4g28440 [Jatropha curcas]
19 Hb_000093_130 0.2625646177 - - glycine-rich RNA-binding protein, putative [Ricinus communis]
20 Hb_007416_200 0.263602346 - - PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1 [Jatropha curcas]

Gene co-expression network

sample Hb_004534_020 Hb_004534_020 Hb_003859_010 Hb_003859_010 Hb_004534_020--Hb_003859_010 Hb_137543_010 Hb_137543_010 Hb_004534_020--Hb_137543_010 Hb_007382_040 Hb_007382_040 Hb_004534_020--Hb_007382_040 Hb_001565_100 Hb_001565_100 Hb_004534_020--Hb_001565_100 Hb_002609_100 Hb_002609_100 Hb_004534_020--Hb_002609_100 Hb_166786_030 Hb_166786_030 Hb_004534_020--Hb_166786_030 Hb_001523_010 Hb_001523_010 Hb_003859_010--Hb_001523_010 Hb_000466_060 Hb_000466_060 Hb_003859_010--Hb_000466_060 Hb_005217_020 Hb_005217_020 Hb_003859_010--Hb_005217_020 Hb_000213_060 Hb_000213_060 Hb_003859_010--Hb_000213_060 Hb_002837_070 Hb_002837_070 Hb_003859_010--Hb_002837_070 Hb_000441_230 Hb_000441_230 Hb_003859_010--Hb_000441_230 Hb_137543_010--Hb_002609_100 Hb_137543_010--Hb_007382_040 Hb_001301_190 Hb_001301_190 Hb_137543_010--Hb_001301_190 Hb_009355_030 Hb_009355_030 Hb_137543_010--Hb_009355_030 Hb_137543_010--Hb_166786_030 Hb_007382_040--Hb_002609_100 Hb_001259_030 Hb_001259_030 Hb_007382_040--Hb_001259_030 Hb_003050_090 Hb_003050_090 Hb_007382_040--Hb_003050_090 Hb_000613_020 Hb_000613_020 Hb_007382_040--Hb_000613_020 Hb_060437_010 Hb_060437_010 Hb_007382_040--Hb_060437_010 Hb_004254_040 Hb_004254_040 Hb_007382_040--Hb_004254_040 Hb_002078_430 Hb_002078_430 Hb_001565_100--Hb_002078_430 Hb_011609_030 Hb_011609_030 Hb_001565_100--Hb_011609_030 Hb_000714_020 Hb_000714_020 Hb_001565_100--Hb_000714_020 Hb_074683_020 Hb_074683_020 Hb_001565_100--Hb_074683_020 Hb_003849_080 Hb_003849_080 Hb_001565_100--Hb_003849_080 Hb_000038_130 Hb_000038_130 Hb_001565_100--Hb_000038_130 Hb_012150_070 Hb_012150_070 Hb_002609_100--Hb_012150_070 Hb_002026_230 Hb_002026_230 Hb_002609_100--Hb_002026_230 Hb_002609_100--Hb_000613_020 Hb_030414_050 Hb_030414_050 Hb_002609_100--Hb_030414_050 Hb_002609_100--Hb_003050_090 Hb_001230_010 Hb_001230_010 Hb_166786_030--Hb_001230_010 Hb_001178_020 Hb_001178_020 Hb_166786_030--Hb_001178_020 Hb_002007_290 Hb_002007_290 Hb_166786_030--Hb_002007_290 Hb_166786_030--Hb_004254_040 Hb_024828_040 Hb_024828_040 Hb_166786_030--Hb_024828_040 Hb_001635_220 Hb_001635_220 Hb_166786_030--Hb_001635_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.08906 0.304952 0.0617728 0 0.303039 0.708837
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.186704 0.146647 0 0 0

CAGE analysis