Hb_004544_010

Information

Type -
Description -
Location Contig4544: 7391-9457
Sequence    

Annotation

kegg
ID pop:POPTR_0010s14920g
description POPTRDRAFT_81350; hypothetical protein
nr
ID XP_012075440.1
description PREDICTED: cytochrome P450 CYP749A22-like [Jatropha curcas]
swissprot
ID H2DH17
description Cytochrome P450 CYP749A22 OS=Panax ginseng PE=2 SV=1
trembl
ID B9HWV6
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s14920g PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 cyp749a22-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004544_010 0.0 - - PREDICTED: cytochrome P450 CYP749A22-like [Jatropha curcas]
2 Hb_043522_010 0.0452260647 - - -
3 Hb_008725_030 0.084029054 - - conserved hypothetical protein [Ricinus communis]
4 Hb_004785_160 0.1000512379 - - PREDICTED: U-box domain-containing protein 28-like [Jatropha curcas]
5 Hb_002973_070 0.124400237 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 40 [Jatropha curcas]
6 Hb_001971_030 0.1339537199 - - PREDICTED: exonuclease 1 [Jatropha curcas]
7 Hb_000110_030 0.1360912074 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
8 Hb_003968_010 0.1380940122 - - UDP-glucosyltransferase, putative [Ricinus communis]
9 Hb_003050_170 0.1520312135 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000862_060 0.152567991 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002774_180 0.1549342326 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
12 Hb_001141_210 0.1554232827 transcription factor TF Family: GNAT PREDICTED: uncharacterized protein LOC105632009 [Jatropha curcas]
13 Hb_096974_010 0.1572391694 - - PREDICTED: uncharacterized protein LOC105123384 isoform X1 [Populus euphratica]
14 Hb_008948_070 0.1652363743 - - PREDICTED: phospholipase D alpha 1-like isoform X1 [Jatropha curcas]
15 Hb_012404_050 0.1653689025 - - PREDICTED: uncharacterized protein LOC101496717 [Cicer arietinum]
16 Hb_002157_100 0.1654888029 - - -
17 Hb_000031_160 0.1665942863 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 17 [Jatropha curcas]
18 Hb_001635_230 0.1684597742 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
19 Hb_003878_020 0.1737396158 - - Epidermis-specific secreted glycoprotein EP1 precursor, putative [Ricinus communis]
20 Hb_036356_010 0.1747480944 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_004544_010 Hb_004544_010 Hb_043522_010 Hb_043522_010 Hb_004544_010--Hb_043522_010 Hb_008725_030 Hb_008725_030 Hb_004544_010--Hb_008725_030 Hb_004785_160 Hb_004785_160 Hb_004544_010--Hb_004785_160 Hb_002973_070 Hb_002973_070 Hb_004544_010--Hb_002973_070 Hb_001971_030 Hb_001971_030 Hb_004544_010--Hb_001971_030 Hb_000110_030 Hb_000110_030 Hb_004544_010--Hb_000110_030 Hb_043522_010--Hb_008725_030 Hb_043522_010--Hb_004785_160 Hb_012404_050 Hb_012404_050 Hb_043522_010--Hb_012404_050 Hb_043522_010--Hb_002973_070 Hb_043522_010--Hb_001971_030 Hb_003968_010 Hb_003968_010 Hb_008725_030--Hb_003968_010 Hb_096974_010 Hb_096974_010 Hb_008725_030--Hb_096974_010 Hb_003050_170 Hb_003050_170 Hb_008725_030--Hb_003050_170 Hb_004297_050 Hb_004297_050 Hb_008725_030--Hb_004297_050 Hb_004785_160--Hb_000110_030 Hb_004785_160--Hb_002973_070 Hb_001141_210 Hb_001141_210 Hb_004785_160--Hb_001141_210 Hb_000031_160 Hb_000031_160 Hb_004785_160--Hb_000031_160 Hb_002774_180 Hb_002774_180 Hb_002973_070--Hb_002774_180 Hb_002973_070--Hb_001141_210 Hb_002973_070--Hb_001971_030 Hb_002973_070--Hb_000031_160 Hb_000771_040 Hb_000771_040 Hb_001971_030--Hb_000771_040 Hb_000483_050 Hb_000483_050 Hb_001971_030--Hb_000483_050 Hb_008948_070 Hb_008948_070 Hb_001971_030--Hb_008948_070 Hb_001971_030--Hb_002774_180 Hb_001971_030--Hb_008725_030 Hb_010573_040 Hb_010573_040 Hb_000110_030--Hb_010573_040 Hb_000598_020 Hb_000598_020 Hb_000110_030--Hb_000598_020 Hb_000110_030--Hb_000031_160 Hb_000110_030--Hb_001141_210 Hb_177215_020 Hb_177215_020 Hb_000110_030--Hb_177215_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.405941 0.456343 0.265293 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.188082 0

CAGE analysis