Hb_004586_340

Information

Type -
Description -
Location Contig4586: 363858-373316
Sequence    

Annotation

kegg
ID pop:POPTR_0005s27290g
description POPTRDRAFT_1079894; hypothetical protein
nr
ID XP_012067947.1
description PREDICTED: serine/threonine-protein kinase PEPKR2 [Jatropha curcas]
swissprot
ID Q8W490
description Serine/threonine-protein kinase PEPKR2 OS=Arabidopsis thaliana GN=PEPKR2 PE=2 SV=1
trembl
ID A0A067LAB1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15852 PE=4 SV=1
Gene Ontology
ID GO:0004683
description serine threonine-protein kinase pepkr2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43571: 365884-366406 , PASA_asmbl_43572: 367964-368401
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004586_340 0.0 - - PREDICTED: serine/threonine-protein kinase PEPKR2 [Jatropha curcas]
2 Hb_001242_060 0.0772238041 - - PREDICTED: uncharacterized protein LOC105139508 [Populus euphratica]
3 Hb_008725_260 0.0776190261 - - PREDICTED: uncharacterized protein LOC105642597 [Jatropha curcas]
4 Hb_000696_150 0.0790180266 - - PREDICTED: pentatricopeptide repeat-containing protein At3g51320 [Jatropha curcas]
5 Hb_000876_070 0.0792584231 - - protein phosphatase 2a, regulatory subunit, putative [Ricinus communis]
6 Hb_008221_140 0.0793014598 - - PREDICTED: uncharacterized protein LOC105644226 [Jatropha curcas]
7 Hb_005779_060 0.0798344254 - - PREDICTED: uncharacterized protein LOC105643212 isoform X2 [Jatropha curcas]
8 Hb_002046_180 0.0801087133 - - PREDICTED: uncharacterized protein LOC105641295 [Jatropha curcas]
9 Hb_002044_080 0.0819653154 - - PREDICTED: secretion-regulating guanine nucleotide exchange factor isoform X2 [Jatropha curcas]
10 Hb_004907_110 0.0833457495 - - PREDICTED: BTB/POZ and MATH domain-containing protein 3 isoform X1 [Jatropha curcas]
11 Hb_000805_020 0.0838999721 - - pumilio/Puf RNA-binding domain-containing family protein [Populus trichocarpa]
12 Hb_000062_220 0.0842258793 - - BnaC02g35870D [Brassica napus]
13 Hb_000866_220 0.084773045 - - PREDICTED: uncharacterized protein LOC105642989 [Jatropha curcas]
14 Hb_000086_400 0.0848805672 - - calmodulin binding protein, putative [Ricinus communis]
15 Hb_000465_460 0.085592337 - - PREDICTED: U3 small nucleolar RNA-associated protein 25 [Jatropha curcas]
16 Hb_002110_150 0.0865890819 - - PREDICTED: serine/threonine-protein kinase PEPKR2 [Jatropha curcas]
17 Hb_058999_020 0.0869678582 - - PREDICTED: mitochondrial outer membrane import complex protein METAXIN [Jatropha curcas]
18 Hb_002183_090 0.0872188672 - - PREDICTED: protein EMSY-LIKE 1 [Jatropha curcas]
19 Hb_004635_100 0.0872575709 - - PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase isoform X1 [Jatropha curcas]
20 Hb_000928_210 0.087852689 - - PREDICTED: uncharacterized protein LOC105632512 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_004586_340 Hb_004586_340 Hb_001242_060 Hb_001242_060 Hb_004586_340--Hb_001242_060 Hb_008725_260 Hb_008725_260 Hb_004586_340--Hb_008725_260 Hb_000696_150 Hb_000696_150 Hb_004586_340--Hb_000696_150 Hb_000876_070 Hb_000876_070 Hb_004586_340--Hb_000876_070 Hb_008221_140 Hb_008221_140 Hb_004586_340--Hb_008221_140 Hb_005779_060 Hb_005779_060 Hb_004586_340--Hb_005779_060 Hb_031527_040 Hb_031527_040 Hb_001242_060--Hb_031527_040 Hb_000757_060 Hb_000757_060 Hb_001242_060--Hb_000757_060 Hb_000016_250 Hb_000016_250 Hb_001242_060--Hb_000016_250 Hb_000030_300 Hb_000030_300 Hb_001242_060--Hb_000030_300 Hb_000563_320 Hb_000563_320 Hb_001242_060--Hb_000563_320 Hb_001242_060--Hb_005779_060 Hb_002110_150 Hb_002110_150 Hb_008725_260--Hb_002110_150 Hb_002046_180 Hb_002046_180 Hb_008725_260--Hb_002046_180 Hb_000866_220 Hb_000866_220 Hb_008725_260--Hb_000866_220 Hb_009178_030 Hb_009178_030 Hb_008725_260--Hb_009178_030 Hb_008725_260--Hb_000876_070 Hb_007532_030 Hb_007532_030 Hb_008725_260--Hb_007532_030 Hb_000679_090 Hb_000679_090 Hb_000696_150--Hb_000679_090 Hb_000696_150--Hb_000866_220 Hb_000056_210 Hb_000056_210 Hb_000696_150--Hb_000056_210 Hb_005015_070 Hb_005015_070 Hb_000696_150--Hb_005015_070 Hb_001157_040 Hb_001157_040 Hb_000696_150--Hb_001157_040 Hb_002739_100 Hb_002739_100 Hb_000876_070--Hb_002739_100 Hb_000876_070--Hb_005779_060 Hb_000876_070--Hb_002046_180 Hb_032202_190 Hb_032202_190 Hb_000876_070--Hb_032202_190 Hb_007691_030 Hb_007691_030 Hb_000876_070--Hb_007691_030 Hb_005618_170 Hb_005618_170 Hb_000876_070--Hb_005618_170 Hb_005463_040 Hb_005463_040 Hb_008221_140--Hb_005463_040 Hb_000676_180 Hb_000676_180 Hb_008221_140--Hb_000676_180 Hb_002183_090 Hb_002183_090 Hb_008221_140--Hb_002183_090 Hb_001226_040 Hb_001226_040 Hb_008221_140--Hb_001226_040 Hb_000167_140 Hb_000167_140 Hb_008221_140--Hb_000167_140 Hb_000085_050 Hb_000085_050 Hb_008221_140--Hb_000085_050 Hb_005779_060--Hb_000016_250 Hb_005779_060--Hb_002046_180 Hb_005779_060--Hb_002739_100 Hb_000062_220 Hb_000062_220 Hb_005779_060--Hb_000062_220 Hb_005779_060--Hb_002110_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.30798 2.2817 1.47934 1.06116 1.9644 3.04146
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.81207 4.51969 4.22492 1.7615 1.67566

CAGE analysis