Hb_004607_040

Information

Type -
Description -
Location Contig4607: 24665-29935
Sequence    

Annotation

kegg
ID rcu:RCOM_1577420
description ADP,ATP carrier protein, putative
nr
ID XP_002513476.1
description ADP,ATP carrier protein, putative [Ricinus communis]
swissprot
ID P25083
description ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1
trembl
ID B9RIA7
description ADP,ATP carrier protein, putative OS=Ricinus communis GN=RCOM_1577420 PE=3 SV=1
Gene Ontology
ID GO:0005743
description carrier protein mitochondrial-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43702: 28524-29111
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004607_040 0.0 - - ADP,ATP carrier protein, putative [Ricinus communis]
2 Hb_012633_030 0.1708149536 - - hypothetical protein RCOM_0452240 [Ricinus communis]
3 Hb_000203_220 0.1984002476 - - PREDICTED: uncharacterized protein LOC105168575 [Sesamum indicum]
4 Hb_001558_030 0.2056788571 - - phosphofructokinase [Hevea brasiliensis]
5 Hb_078081_010 0.2094894484 - - hypothetical protein PRUPE_ppa015726mg [Prunus persica]
6 Hb_000046_610 0.2142198049 - - PREDICTED: putative cullin-like protein 2 isoform X3 [Populus euphratica]
7 Hb_004346_010 0.2198088557 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000058_090 0.2208304508 - - -
9 Hb_001474_010 0.2331139704 - - PREDICTED: synaptotagmin-3 isoform X1 [Jatropha curcas]
10 Hb_000186_290 0.2332913112 - - PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8 isoform X1 [Jatropha curcas]
11 Hb_029977_010 0.2333384609 - - catalytic, putative [Ricinus communis]
12 Hb_000116_120 0.2346875555 - - PREDICTED: disease resistance response protein 206-like [Jatropha curcas]
13 Hb_000393_030 0.2405869445 - - UDP-glucosyltransferase, putative [Ricinus communis]
14 Hb_008226_020 0.2410252198 - - hypothetical protein JCGZ_03321 [Jatropha curcas]
15 Hb_000189_590 0.2412209855 - - PREDICTED: cysteine synthase [Jatropha curcas]
16 Hb_001493_020 0.2492923033 - - leucine-rich repeat receptor-like protein kinase [Manihot esculenta]
17 Hb_130563_010 0.2498759723 - - PREDICTED: ABC transporter C family member 3-like isoform X1 [Jatropha curcas]
18 Hb_001252_190 0.2514052619 desease resistance Gene Name: NB-ARC -
19 Hb_003398_090 0.2519385857 - - PREDICTED: expansin-A4 [Jatropha curcas]
20 Hb_000139_500 0.2536592803 - - PREDICTED: putative uncharacterized protein DDB_G0286901 [Prunus mume]

Gene co-expression network

sample Hb_004607_040 Hb_004607_040 Hb_012633_030 Hb_012633_030 Hb_004607_040--Hb_012633_030 Hb_000203_220 Hb_000203_220 Hb_004607_040--Hb_000203_220 Hb_001558_030 Hb_001558_030 Hb_004607_040--Hb_001558_030 Hb_078081_010 Hb_078081_010 Hb_004607_040--Hb_078081_010 Hb_000046_610 Hb_000046_610 Hb_004607_040--Hb_000046_610 Hb_004346_010 Hb_004346_010 Hb_004607_040--Hb_004346_010 Hb_000058_090 Hb_000058_090 Hb_012633_030--Hb_000058_090 Hb_002311_270 Hb_002311_270 Hb_012633_030--Hb_002311_270 Hb_012633_030--Hb_078081_010 Hb_000189_590 Hb_000189_590 Hb_012633_030--Hb_000189_590 Hb_012633_030--Hb_004346_010 Hb_000203_220--Hb_012633_030 Hb_003470_060 Hb_003470_060 Hb_000203_220--Hb_003470_060 Hb_000203_220--Hb_001558_030 Hb_000203_220--Hb_004346_010 Hb_000203_220--Hb_002311_270 Hb_001558_030--Hb_000046_610 Hb_002539_010 Hb_002539_010 Hb_001558_030--Hb_002539_010 Hb_009467_040 Hb_009467_040 Hb_001558_030--Hb_009467_040 Hb_000116_590 Hb_000116_590 Hb_001558_030--Hb_000116_590 Hb_000116_120 Hb_000116_120 Hb_001558_030--Hb_000116_120 Hb_000186_290 Hb_000186_290 Hb_078081_010--Hb_000186_290 Hb_002739_040 Hb_002739_040 Hb_078081_010--Hb_002739_040 Hb_001040_200 Hb_001040_200 Hb_078081_010--Hb_001040_200 Hb_000834_040 Hb_000834_040 Hb_078081_010--Hb_000834_040 Hb_002307_010 Hb_002307_010 Hb_078081_010--Hb_002307_010 Hb_001663_120 Hb_001663_120 Hb_078081_010--Hb_001663_120 Hb_056101_010 Hb_056101_010 Hb_000046_610--Hb_056101_010 Hb_025526_010 Hb_025526_010 Hb_000046_610--Hb_025526_010 Hb_010761_030 Hb_010761_030 Hb_000046_610--Hb_010761_030 Hb_000661_230 Hb_000661_230 Hb_000046_610--Hb_000661_230 Hb_000230_230 Hb_000230_230 Hb_000046_610--Hb_000230_230 Hb_000317_220 Hb_000317_220 Hb_000046_610--Hb_000317_220 Hb_004346_010--Hb_000186_290 Hb_001916_030 Hb_001916_030 Hb_004346_010--Hb_001916_030 Hb_004545_070 Hb_004545_070 Hb_004346_010--Hb_004545_070 Hb_007885_020 Hb_007885_020 Hb_004346_010--Hb_007885_020 Hb_009545_030 Hb_009545_030 Hb_004346_010--Hb_009545_030 Hb_004346_010--Hb_078081_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0139576 0.0128854 0.0678884 0 0.0148048
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0192208 0 0 0.126198 0.0320894

CAGE analysis