Hb_004611_050

Information

Type -
Description -
Location Contig4611: 59571-64024
Sequence    

Annotation

kegg
ID rcu:RCOM_0963860
description hypothetical protein
nr
ID XP_012065612.1
description PREDICTED: uncharacterized protein LOC105628744 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L571
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16864 PE=4 SV=1
Gene Ontology
ID GO:0009507
description structural constituent of ribosome

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004611_050 0.0 - - PREDICTED: uncharacterized protein LOC105628744 [Jatropha curcas]
2 Hb_093364_010 0.0727807348 - - PREDICTED: uncharacterized protein LOC105636199 [Jatropha curcas]
3 Hb_000990_040 0.0744757285 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 7 [Jatropha curcas]
4 Hb_004117_280 0.0804344071 - - hypothetical protein JCGZ_00361 [Jatropha curcas]
5 Hb_029095_010 0.0940996301 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21060 [Jatropha curcas]
6 Hb_000020_020 0.0976461048 - - hypothetical protein JCGZ_06491 [Jatropha curcas]
7 Hb_000185_170 0.1006255661 - - ATP binding protein, putative [Ricinus communis]
8 Hb_000046_430 0.1045531753 - - hypothetical protein JCGZ_02013 [Jatropha curcas]
9 Hb_007894_120 0.1070084509 - - PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like isoform X1 [Jatropha curcas]
10 Hb_005486_020 0.1094400825 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT5 [Jatropha curcas]
11 Hb_030982_050 0.11006843 - - PREDICTED: gamma-glutamyl hydrolase 2-like [Jatropha curcas]
12 Hb_000689_010 0.1138720865 desease resistance Gene Name: LRR_8 PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
13 Hb_006970_170 0.116220816 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
14 Hb_070136_010 0.1186725787 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
15 Hb_002010_100 0.1197169134 - - PREDICTED: uncharacterized protein LOC105633355 [Jatropha curcas]
16 Hb_007120_130 0.1210504033 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002078_320 0.1231239779 - - PREDICTED: glucuronoxylan 4-O-methyltransferase 1 [Jatropha curcas]
18 Hb_044653_050 0.1238389545 - - PREDICTED: CTL-like protein DDB_G0274487 isoform X1 [Jatropha curcas]
19 Hb_000199_040 0.12566465 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
20 Hb_003849_030 0.1276301535 - - hypothetical protein AALP_AA5G029900 [Arabis alpina]

Gene co-expression network

sample Hb_004611_050 Hb_004611_050 Hb_093364_010 Hb_093364_010 Hb_004611_050--Hb_093364_010 Hb_000990_040 Hb_000990_040 Hb_004611_050--Hb_000990_040 Hb_004117_280 Hb_004117_280 Hb_004611_050--Hb_004117_280 Hb_029095_010 Hb_029095_010 Hb_004611_050--Hb_029095_010 Hb_000020_020 Hb_000020_020 Hb_004611_050--Hb_000020_020 Hb_000185_170 Hb_000185_170 Hb_004611_050--Hb_000185_170 Hb_093364_010--Hb_029095_010 Hb_093364_010--Hb_000990_040 Hb_093364_010--Hb_000020_020 Hb_005486_020 Hb_005486_020 Hb_093364_010--Hb_005486_020 Hb_093364_010--Hb_000185_170 Hb_000990_040--Hb_005486_020 Hb_000990_040--Hb_029095_010 Hb_000990_040--Hb_000185_170 Hb_007894_120 Hb_007894_120 Hb_000990_040--Hb_007894_120 Hb_003092_020 Hb_003092_020 Hb_004117_280--Hb_003092_020 Hb_002817_030 Hb_002817_030 Hb_004117_280--Hb_002817_030 Hb_002490_060 Hb_002490_060 Hb_004117_280--Hb_002490_060 Hb_000627_040 Hb_000627_040 Hb_004117_280--Hb_000627_040 Hb_000163_180 Hb_000163_180 Hb_004117_280--Hb_000163_180 Hb_029095_010--Hb_005486_020 Hb_002596_090 Hb_002596_090 Hb_029095_010--Hb_002596_090 Hb_031685_010 Hb_031685_010 Hb_029095_010--Hb_031685_010 Hb_001918_030 Hb_001918_030 Hb_000020_020--Hb_001918_030 Hb_000020_020--Hb_029095_010 Hb_001266_130 Hb_001266_130 Hb_000020_020--Hb_001266_130 Hb_000046_430 Hb_000046_430 Hb_000020_020--Hb_000046_430 Hb_070136_010 Hb_070136_010 Hb_000185_170--Hb_070136_010 Hb_000037_200 Hb_000037_200 Hb_000185_170--Hb_000037_200 Hb_002078_320 Hb_002078_320 Hb_000185_170--Hb_002078_320 Hb_000987_020 Hb_000987_020 Hb_000185_170--Hb_000987_020 Hb_001629_120 Hb_001629_120 Hb_000185_170--Hb_001629_120 Hb_000265_170 Hb_000265_170 Hb_000185_170--Hb_000265_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0950314 0.194599 0.0994931 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0622139 0.1032

CAGE analysis