Hb_004619_010

Information

Type -
Description -
Location Contig4619: 2305-5450
Sequence    

Annotation

kegg
ID cit:102607254
description probable LRR receptor-like serine/threonine-protein kinase At3g47570-like
nr
ID XP_012071394.1
description PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067KRV9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05019 PE=3 SV=1
Gene Ontology
ID GO:0004672
description receptor-like protein kinase at3g47110

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004619_010 0.0 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
2 Hb_001761_040 0.0964831833 - - PREDICTED: beta-amyrin synthase-like [Jatropha curcas]
3 Hb_007666_040 0.1248723282 - - PREDICTED: ent-kaur-16-ene synthase, chloroplastic-like [Jatropha curcas]
4 Hb_169388_010 0.1262856284 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
5 Hb_003385_090 0.1344807795 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
6 Hb_032651_060 0.1373003876 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_151364_010 0.1459276369 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
8 Hb_003117_060 0.1474065536 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
9 Hb_001489_030 0.1513549654 - - PREDICTED: protein NRT1/ PTR FAMILY 4.6 [Jatropha curcas]
10 Hb_001454_160 0.1516738201 - - PREDICTED: translocase of chloroplast 159, chloroplastic [Jatropha curcas]
11 Hb_018563_040 0.1538625708 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
12 Hb_000535_030 0.1554835801 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
13 Hb_004195_190 0.1557367724 - - WD-repeat protein, putative [Ricinus communis]
14 Hb_008053_070 0.1566379469 - - PREDICTED: U-box domain-containing protein 33-like isoform X4 [Jatropha curcas]
15 Hb_011909_030 0.1603422986 - - hypothetical protein JCGZ_00732 [Jatropha curcas]
16 Hb_001114_210 0.1625896488 - - PREDICTED: periaxin [Jatropha curcas]
17 Hb_002555_020 0.1632646962 - - Receptor-like protein kinase [Medicago truncatula]
18 Hb_001376_040 0.1682987524 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Populus euphratica]
19 Hb_012053_030 0.1692251906 - - PREDICTED: GDSL esterase/lipase At5g22810 [Jatropha curcas]
20 Hb_000043_080 0.1705457839 - - lipid binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_004619_010 Hb_004619_010 Hb_001761_040 Hb_001761_040 Hb_004619_010--Hb_001761_040 Hb_007666_040 Hb_007666_040 Hb_004619_010--Hb_007666_040 Hb_169388_010 Hb_169388_010 Hb_004619_010--Hb_169388_010 Hb_003385_090 Hb_003385_090 Hb_004619_010--Hb_003385_090 Hb_032651_060 Hb_032651_060 Hb_004619_010--Hb_032651_060 Hb_151364_010 Hb_151364_010 Hb_004619_010--Hb_151364_010 Hb_052186_010 Hb_052186_010 Hb_001761_040--Hb_052186_010 Hb_008053_070 Hb_008053_070 Hb_001761_040--Hb_008053_070 Hb_001761_040--Hb_007666_040 Hb_001761_040--Hb_032651_060 Hb_001761_040--Hb_151364_010 Hb_003117_060 Hb_003117_060 Hb_007666_040--Hb_003117_060 Hb_007666_040--Hb_003385_090 Hb_000535_030 Hb_000535_030 Hb_007666_040--Hb_000535_030 Hb_012053_030 Hb_012053_030 Hb_007666_040--Hb_012053_030 Hb_001114_210 Hb_001114_210 Hb_007666_040--Hb_001114_210 Hb_001489_030 Hb_001489_030 Hb_007666_040--Hb_001489_030 Hb_018563_040 Hb_018563_040 Hb_169388_010--Hb_018563_040 Hb_169388_010--Hb_003385_090 Hb_169388_010--Hb_032651_060 Hb_001363_010 Hb_001363_010 Hb_169388_010--Hb_001363_010 Hb_001454_160 Hb_001454_160 Hb_169388_010--Hb_001454_160 Hb_003385_090--Hb_000535_030 Hb_003385_090--Hb_032651_060 Hb_001080_040 Hb_001080_040 Hb_003385_090--Hb_001080_040 Hb_049562_010 Hb_049562_010 Hb_003385_090--Hb_049562_010 Hb_003385_090--Hb_001114_210 Hb_032651_060--Hb_000535_030 Hb_032651_060--Hb_049562_010 Hb_032651_060--Hb_001080_040 Hb_032651_060--Hb_001363_010 Hb_005649_120 Hb_005649_120 Hb_032651_060--Hb_005649_120 Hb_005489_160 Hb_005489_160 Hb_151364_010--Hb_005489_160 Hb_151364_010--Hb_008053_070 Hb_000300_570 Hb_000300_570 Hb_151364_010--Hb_000300_570 Hb_151364_010--Hb_012053_030 Hb_005797_030 Hb_005797_030 Hb_151364_010--Hb_005797_030 Hb_002007_230 Hb_002007_230 Hb_151364_010--Hb_002007_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0516097 4.86321 0.0663369 0.093334 0.0655963 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.115112 3.61233 0.256156

CAGE analysis