Hb_004631_170

Information

Type -
Description -
Location Contig4631: 143584-144024
Sequence    

Annotation

kegg
ID rcu:RCOM_0417180
description hypothetical protein
nr
ID XP_002534524.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T8F5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0417180 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004631_170 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_150440_010 0.0777347009 - - -
3 Hb_006829_070 0.1265012864 - - PREDICTED: uncharacterized protein LOC105632920 [Jatropha curcas]
4 Hb_002539_050 0.129111963 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Jatropha curcas]
5 Hb_000424_030 0.1315052948 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002026_020 0.1321044691 - - hypothetical protein POPTR_0012s129501g, partial [Populus trichocarpa]
7 Hb_186247_010 0.1347819284 - - PREDICTED: uridine 5'-monophosphate synthase-like [Pyrus x bretschneideri]
8 Hb_005941_030 0.1411881602 transcription factor TF Family: HB DNA binding protein, putative [Ricinus communis]
9 Hb_012762_060 0.1469051817 - - Vitellogenic carboxypeptidase, putative [Ricinus communis]
10 Hb_014497_040 0.1519244984 - - PREDICTED: calvin cycle protein CP12-3, chloroplastic [Jatropha curcas]
11 Hb_000271_220 0.1565709697 - - PREDICTED: xylosyltransferase 2 [Jatropha curcas]
12 Hb_000603_020 0.1565876513 - - PREDICTED: uncharacterized protein LOC105638063 isoform X1 [Jatropha curcas]
13 Hb_002488_010 0.1578172089 - - PREDICTED: gamma-interferon-inducible-lysosomal thiol reductase [Jatropha curcas]
14 Hb_000363_180 0.1590390861 - - PREDICTED: uncharacterized protein LOC105633052 [Jatropha curcas]
15 Hb_003929_190 0.1594770922 - - PREDICTED: probable receptor-like protein kinase At5g18500 [Jatropha curcas]
16 Hb_017159_010 0.1604447109 - - -
17 Hb_003680_030 0.1611149946 - - PREDICTED: aspartic proteinase-like protein 2 isoform X3 [Jatropha curcas]
18 Hb_010315_100 0.161818643 - - PREDICTED: uncharacterized protein LOC104420162 [Eucalyptus grandis]
19 Hb_002900_150 0.1627656625 - - PREDICTED: syntaxin-81 [Jatropha curcas]
20 Hb_002920_010 0.1642766186 - - PREDICTED: sulfiredoxin, chloroplastic/mitochondrial [Populus euphratica]

Gene co-expression network

sample Hb_004631_170 Hb_004631_170 Hb_150440_010 Hb_150440_010 Hb_004631_170--Hb_150440_010 Hb_006829_070 Hb_006829_070 Hb_004631_170--Hb_006829_070 Hb_002539_050 Hb_002539_050 Hb_004631_170--Hb_002539_050 Hb_000424_030 Hb_000424_030 Hb_004631_170--Hb_000424_030 Hb_002026_020 Hb_002026_020 Hb_004631_170--Hb_002026_020 Hb_186247_010 Hb_186247_010 Hb_004631_170--Hb_186247_010 Hb_002920_010 Hb_002920_010 Hb_150440_010--Hb_002920_010 Hb_150440_010--Hb_002539_050 Hb_150440_010--Hb_000424_030 Hb_150440_010--Hb_006829_070 Hb_000603_020 Hb_000603_020 Hb_150440_010--Hb_000603_020 Hb_012762_060 Hb_012762_060 Hb_006829_070--Hb_012762_060 Hb_006829_070--Hb_002026_020 Hb_003680_030 Hb_003680_030 Hb_006829_070--Hb_003680_030 Hb_006829_070--Hb_000424_030 Hb_002217_320 Hb_002217_320 Hb_006829_070--Hb_002217_320 Hb_006925_050 Hb_006925_050 Hb_006829_070--Hb_006925_050 Hb_002539_050--Hb_186247_010 Hb_003929_190 Hb_003929_190 Hb_002539_050--Hb_003929_190 Hb_000363_180 Hb_000363_180 Hb_002539_050--Hb_000363_180 Hb_010315_100 Hb_010315_100 Hb_002539_050--Hb_010315_100 Hb_148346_010 Hb_148346_010 Hb_002539_050--Hb_148346_010 Hb_000424_030--Hb_000603_020 Hb_000271_220 Hb_000271_220 Hb_000424_030--Hb_000271_220 Hb_000424_030--Hb_002217_320 Hb_000622_330 Hb_000622_330 Hb_000424_030--Hb_000622_330 Hb_000424_030--Hb_006925_050 Hb_001328_050 Hb_001328_050 Hb_002026_020--Hb_001328_050 Hb_000030_020 Hb_000030_020 Hb_002026_020--Hb_000030_020 Hb_002026_020--Hb_012762_060 Hb_002900_150 Hb_002900_150 Hb_002026_020--Hb_002900_150 Hb_002026_020--Hb_003680_030 Hb_001188_050 Hb_001188_050 Hb_186247_010--Hb_001188_050 Hb_186247_010--Hb_006829_070 Hb_186247_010--Hb_010315_100 Hb_186247_010--Hb_002026_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.59733 29.9575 44.8294 87.2171 7.51058 21.3716
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.16091 3.92019 1.2902 15.4838 25.5645

CAGE analysis