Hb_004648_010

Information

Type -
Description -
Location Contig4648: 8757-10980
Sequence    

Annotation

kegg
ID rcu:RCOM_1613660
description Adenosine 3'-phospho 5'-phosphosulfate transporter, putative
nr
ID XP_010090629.1
description UDP-galactose/UDP-glucose transporter 4 [Morus notabilis]
swissprot
ID Q9LDX3
description UDP-galactose/UDP-glucose transporter 4 OS=Arabidopsis thaliana GN=UTR4 PE=2 SV=1
trembl
ID W9QLE0
description UDP-galactose/UDP-glucose transporter 4 OS=Morus notabilis GN=L484_003946 PE=4 SV=1
Gene Ontology
ID GO:0055085
description udp-galactose udp-glucose transporter 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43920: 8668-10913
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004648_010 0.0 - - UDP-galactose/UDP-glucose transporter 4 [Morus notabilis]
2 Hb_004724_120 0.2883918455 - - PREDICTED: ferredoxin, root R-B2 [Jatropha curcas]
3 Hb_084858_010 0.2917726324 - - Uncharacterized protein isoform 3 [Theobroma cacao]
4 Hb_000415_070 0.2966598801 - - -
5 Hb_003925_030 0.3018770284 - - conserved hypothetical protein [Ricinus communis]
6 Hb_010534_050 0.3020705939 - - PREDICTED: 40S ribosomal protein S7 [Jatropha curcas]
7 Hb_006769_010 0.3021778848 - - hypothetical protein JCGZ_00291 [Jatropha curcas]
8 Hb_021420_010 0.3048923237 - - hypothetical protein CICLE_v10029508mg [Citrus clementina]
9 Hb_058328_010 0.3050588086 - - JHL06B08.2 [Jatropha curcas]
10 Hb_172572_010 0.3100086662 - - PREDICTED: ubiquitin thioesterase otubain-like [Jatropha curcas]
11 Hb_000724_030 0.3139769554 - - PREDICTED: uncharacterized protein LOC105645165 [Jatropha curcas]
12 Hb_096346_010 0.3182544512 - - unnamed protein product [Coffea canephora]
13 Hb_148079_010 0.3184011733 - - PREDICTED: WD repeat-containing protein 82 [Jatropha curcas]
14 Hb_000853_400 0.3199021113 - - PREDICTED: CTP synthase [Jatropha curcas]
15 Hb_019053_010 0.321152762 - - -
16 Hb_000322_180 0.3241488667 - - recA family protein [Populus trichocarpa]
17 Hb_012738_030 0.3241774978 - - conserved hypothetical protein [Ricinus communis]
18 Hb_012506_010 0.3249170045 - - PREDICTED: UDP-D-apiose/UDP-D-xylose synthase 2 [Jatropha curcas]
19 Hb_129204_040 0.3250421919 - - PREDICTED: meiotic nuclear division protein 1 homolog isoform X1 [Jatropha curcas]
20 Hb_000915_150 0.3274351482 - - -

Gene co-expression network

sample Hb_004648_010 Hb_004648_010 Hb_004724_120 Hb_004724_120 Hb_004648_010--Hb_004724_120 Hb_084858_010 Hb_084858_010 Hb_004648_010--Hb_084858_010 Hb_000415_070 Hb_000415_070 Hb_004648_010--Hb_000415_070 Hb_003925_030 Hb_003925_030 Hb_004648_010--Hb_003925_030 Hb_010534_050 Hb_010534_050 Hb_004648_010--Hb_010534_050 Hb_006769_010 Hb_006769_010 Hb_004648_010--Hb_006769_010 Hb_000733_270 Hb_000733_270 Hb_004724_120--Hb_000733_270 Hb_000130_060 Hb_000130_060 Hb_004724_120--Hb_000130_060 Hb_001636_020 Hb_001636_020 Hb_004724_120--Hb_001636_020 Hb_000679_200 Hb_000679_200 Hb_004724_120--Hb_000679_200 Hb_002666_020 Hb_002666_020 Hb_004724_120--Hb_002666_020 Hb_054885_020 Hb_054885_020 Hb_004724_120--Hb_054885_020 Hb_000724_030 Hb_000724_030 Hb_084858_010--Hb_000724_030 Hb_000062_060 Hb_000062_060 Hb_084858_010--Hb_000062_060 Hb_002232_150 Hb_002232_150 Hb_084858_010--Hb_002232_150 Hb_007846_040 Hb_007846_040 Hb_084858_010--Hb_007846_040 Hb_084858_010--Hb_004724_120 Hb_000270_210 Hb_000270_210 Hb_084858_010--Hb_000270_210 Hb_001517_030 Hb_001517_030 Hb_000415_070--Hb_001517_030 Hb_143800_010 Hb_143800_010 Hb_000415_070--Hb_143800_010 Hb_005542_090 Hb_005542_090 Hb_000415_070--Hb_005542_090 Hb_017462_010 Hb_017462_010 Hb_000415_070--Hb_017462_010 Hb_015026_150 Hb_015026_150 Hb_000415_070--Hb_015026_150 Hb_000136_180 Hb_000136_180 Hb_000415_070--Hb_000136_180 Hb_131967_010 Hb_131967_010 Hb_003925_030--Hb_131967_010 Hb_003925_030--Hb_006769_010 Hb_000023_160 Hb_000023_160 Hb_003925_030--Hb_000023_160 Hb_000029_100 Hb_000029_100 Hb_003925_030--Hb_000029_100 Hb_002148_020 Hb_002148_020 Hb_003925_030--Hb_002148_020 Hb_003925_030--Hb_000415_070 Hb_001050_060 Hb_001050_060 Hb_010534_050--Hb_001050_060 Hb_001711_050 Hb_001711_050 Hb_010534_050--Hb_001711_050 Hb_000928_050 Hb_000928_050 Hb_010534_050--Hb_000928_050 Hb_071869_010 Hb_071869_010 Hb_010534_050--Hb_071869_010 Hb_141296_010 Hb_141296_010 Hb_010534_050--Hb_141296_010 Hb_000206_190 Hb_000206_190 Hb_010534_050--Hb_000206_190 Hb_006769_010--Hb_000029_100 Hb_006769_010--Hb_000130_060 Hb_006769_010--Hb_004724_120 Hb_002836_100 Hb_002836_100 Hb_006769_010--Hb_002836_100 Hb_134894_010 Hb_134894_010 Hb_006769_010--Hb_134894_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.29231 0.190437 1.45976 1.27139 0.0477436 3.76679
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.265217 0.357656 0.611624 3.50659 0

CAGE analysis