Hb_004650_080

Information

Type -
Description -
Location Contig4650: 80225-86323
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 012_D19r.ab1: 75854-92932

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004650_080 0.0 - - -
2 Hb_001329_260 0.1897276727 - - PREDICTED: uncharacterized protein LOC105642694 isoform X1 [Jatropha curcas]
3 Hb_004097_020 0.1958317558 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003768_040 0.2010236714 - - ubiquitin-protein ligase, putative [Ricinus communis]
5 Hb_001946_360 0.2152094902 - - PREDICTED: nuclear pore complex protein NUP88 [Jatropha curcas]
6 Hb_168978_040 0.2190101181 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Jatropha curcas]
7 Hb_097433_010 0.2193255544 - - PREDICTED: TPR repeat-containing thioredoxin TDX [Jatropha curcas]
8 Hb_003327_030 0.2221336167 - - Hsc70-interacting protein, putative [Ricinus communis]
9 Hb_008749_050 0.2223332768 - - PREDICTED: uncharacterized J domain-containing protein C4H3.01 [Jatropha curcas]
10 Hb_141838_010 0.2247593711 - - -
11 Hb_031073_010 0.22605281 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like [Jatropha curcas]
12 Hb_025194_030 0.2261080176 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
13 Hb_002918_310 0.2267835812 - - PREDICTED: dnaJ protein homolog 1-like [Jatropha curcas]
14 Hb_003320_030 0.2278835395 - - conserved hypothetical protein [Ricinus communis]
15 Hb_004712_110 0.2335268784 - - 30S ribosomal protein S10, putative [Ricinus communis]
16 Hb_002232_290 0.234270401 - - -
17 Hb_000857_050 0.2369234621 - - PREDICTED: protein YLS9 [Jatropha curcas]
18 Hb_000040_050 0.2372654527 - - PREDICTED: uncharacterized protein LOC102617857 isoform X1 [Citrus sinensis]
19 Hb_011515_030 0.2395167519 - - -
20 Hb_002311_250 0.2400546157 - - hypothetical protein JCGZ_18936 [Jatropha curcas]

Gene co-expression network

sample Hb_004650_080 Hb_004650_080 Hb_001329_260 Hb_001329_260 Hb_004650_080--Hb_001329_260 Hb_004097_020 Hb_004097_020 Hb_004650_080--Hb_004097_020 Hb_003768_040 Hb_003768_040 Hb_004650_080--Hb_003768_040 Hb_001946_360 Hb_001946_360 Hb_004650_080--Hb_001946_360 Hb_168978_040 Hb_168978_040 Hb_004650_080--Hb_168978_040 Hb_097433_010 Hb_097433_010 Hb_004650_080--Hb_097433_010 Hb_003320_030 Hb_003320_030 Hb_001329_260--Hb_003320_030 Hb_001196_050 Hb_001196_050 Hb_001329_260--Hb_001196_050 Hb_000857_050 Hb_000857_050 Hb_001329_260--Hb_000857_050 Hb_098315_110 Hb_098315_110 Hb_001329_260--Hb_098315_110 Hb_000331_610 Hb_000331_610 Hb_001329_260--Hb_000331_610 Hb_000140_150 Hb_000140_150 Hb_004097_020--Hb_000140_150 Hb_002918_310 Hb_002918_310 Hb_004097_020--Hb_002918_310 Hb_004097_020--Hb_001946_360 Hb_006631_010 Hb_006631_010 Hb_004097_020--Hb_006631_010 Hb_000173_210 Hb_000173_210 Hb_004097_020--Hb_000173_210 Hb_000619_070 Hb_000619_070 Hb_004097_020--Hb_000619_070 Hb_000099_220 Hb_000099_220 Hb_003768_040--Hb_000099_220 Hb_003768_040--Hb_098315_110 Hb_002311_250 Hb_002311_250 Hb_003768_040--Hb_002311_250 Hb_003768_040--Hb_001946_360 Hb_130177_010 Hb_130177_010 Hb_003768_040--Hb_130177_010 Hb_000431_020 Hb_000431_020 Hb_003768_040--Hb_000431_020 Hb_005228_120 Hb_005228_120 Hb_001946_360--Hb_005228_120 Hb_000317_080 Hb_000317_080 Hb_001946_360--Hb_000317_080 Hb_000395_140 Hb_000395_140 Hb_001946_360--Hb_000395_140 Hb_001946_360--Hb_002311_250 Hb_001946_360--Hb_130177_010 Hb_001341_040 Hb_001341_040 Hb_001946_360--Hb_001341_040 Hb_007382_020 Hb_007382_020 Hb_168978_040--Hb_007382_020 Hb_025194_030 Hb_025194_030 Hb_168978_040--Hb_025194_030 Hb_011515_030 Hb_011515_030 Hb_168978_040--Hb_011515_030 Hb_002983_100 Hb_002983_100 Hb_168978_040--Hb_002983_100 Hb_029508_010 Hb_029508_010 Hb_168978_040--Hb_029508_010 Hb_003327_030 Hb_003327_030 Hb_097433_010--Hb_003327_030 Hb_035947_010 Hb_035947_010 Hb_097433_010--Hb_035947_010 Hb_085375_010 Hb_085375_010 Hb_097433_010--Hb_085375_010 Hb_097433_010--Hb_002918_310 Hb_004635_130 Hb_004635_130 Hb_097433_010--Hb_004635_130 Hb_002814_120 Hb_002814_120 Hb_097433_010--Hb_002814_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.29086 0.769931 0.118509 0.293972 6.40486 0.766758
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.263115 0.0689416 1.09959 0.168751 0.406023

CAGE analysis