Hb_004693_010

Information

Type -
Description -
Location Contig4693: 28933-29745
Sequence    

Annotation

kegg
ID tcc:TCM_020877
description hypothetical protein
nr
ID KDP40323.1
description hypothetical protein JCGZ_02321 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KZD7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02321 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44188: 28729-29762
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004693_010 0.0 - - hypothetical protein JCGZ_02321 [Jatropha curcas]
2 Hb_058620_050 0.0519332602 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
3 Hb_058620_040 0.0540060566 - - Myrcene synthase, chloroplastic, putative isoform 1 [Theobroma cacao]
4 Hb_000712_070 0.0579317882 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000141_070 0.0580678195 - - l-lactate dehydrogenase, putative [Ricinus communis]
6 Hb_003334_080 0.0586731651 - - Reticuline oxidase precursor, putative [Ricinus communis]
7 Hb_000318_440 0.0601110414 - - PREDICTED: allene oxide synthase 2-like [Jatropha curcas]
8 Hb_003090_070 0.0630321516 - - PREDICTED: laccase-7 [Jatropha curcas]
9 Hb_002805_230 0.0685926906 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
10 Hb_001930_060 0.0689347798 - - PREDICTED: cytochrome P450 71D9-like [Fragaria vesca subsp. vesca]
11 Hb_000059_100 0.0689348691 - - Basic blue protein, putative [Ricinus communis]
12 Hb_009568_010 0.0729596846 - - hypothetical protein POPTR_0001s46700g [Populus trichocarpa]
13 Hb_001040_190 0.0731783839 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-2a-like [Jatropha curcas]
14 Hb_002553_170 0.0748461499 - - PREDICTED: early nodulin-75-like [Jatropha curcas]
15 Hb_000221_200 0.0784541341 - - hypothetical protein JCGZ_15819 [Jatropha curcas]
16 Hb_007483_040 0.0785046091 - - PREDICTED: protein SRG1-like [Jatropha curcas]
17 Hb_039562_010 0.0789289675 - - PREDICTED: protein SRG1-like [Jatropha curcas]
18 Hb_002835_020 0.0792209783 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
19 Hb_005614_040 0.0877329479 - - unnamed protein product [Coffea canephora]
20 Hb_058620_010 0.0882555425 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_004693_010 Hb_004693_010 Hb_058620_050 Hb_058620_050 Hb_004693_010--Hb_058620_050 Hb_058620_040 Hb_058620_040 Hb_004693_010--Hb_058620_040 Hb_000712_070 Hb_000712_070 Hb_004693_010--Hb_000712_070 Hb_000141_070 Hb_000141_070 Hb_004693_010--Hb_000141_070 Hb_003334_080 Hb_003334_080 Hb_004693_010--Hb_003334_080 Hb_000318_440 Hb_000318_440 Hb_004693_010--Hb_000318_440 Hb_058620_050--Hb_058620_040 Hb_058620_050--Hb_000141_070 Hb_058620_050--Hb_003334_080 Hb_009568_010 Hb_009568_010 Hb_058620_050--Hb_009568_010 Hb_007483_040 Hb_007483_040 Hb_058620_050--Hb_007483_040 Hb_058620_040--Hb_003334_080 Hb_058620_040--Hb_000141_070 Hb_006925_010 Hb_006925_010 Hb_058620_040--Hb_006925_010 Hb_000086_710 Hb_000086_710 Hb_058620_040--Hb_000086_710 Hb_002805_230 Hb_002805_230 Hb_000712_070--Hb_002805_230 Hb_003090_070 Hb_003090_070 Hb_000712_070--Hb_003090_070 Hb_000712_070--Hb_000141_070 Hb_000712_070--Hb_003334_080 Hb_000712_070--Hb_007483_040 Hb_000141_070--Hb_003334_080 Hb_000141_070--Hb_009568_010 Hb_000141_070--Hb_007483_040 Hb_001456_040 Hb_001456_040 Hb_000141_070--Hb_001456_040 Hb_003334_080--Hb_009568_010 Hb_002835_020 Hb_002835_020 Hb_003334_080--Hb_002835_020 Hb_002553_170 Hb_002553_170 Hb_003334_080--Hb_002553_170 Hb_039562_010 Hb_039562_010 Hb_000318_440--Hb_039562_010 Hb_000059_100 Hb_000059_100 Hb_000318_440--Hb_000059_100 Hb_007532_050 Hb_007532_050 Hb_000318_440--Hb_007532_050 Hb_000318_440--Hb_002805_230 Hb_000318_440--Hb_003090_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 5.78312 9.27593 20.7075 0.0538801 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0519455 0.564608 641.682 4.80424

CAGE analysis