Hb_004712_080

Information

Type -
Description -
Location Contig4712: 40141-42062
Sequence    

Annotation

kegg
ID rcu:RCOM_0520560
description cytochrome P450, putative (EC:1.14.13.68)
nr
ID XP_012070987.1
description PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
swissprot
ID O48923
description Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1
trembl
ID A0A067KT17
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01014 PE=3 SV=1
Gene Ontology
ID GO:0005506
description premnaspirodiene oxygenase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004712_080 0.0 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
2 Hb_012796_050 0.1023673929 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
3 Hb_175968_010 0.1032432596 - - hypothetical protein JCGZ_21281 [Jatropha curcas]
4 Hb_001279_220 0.1047575817 - - protein binding protein, putative [Ricinus communis]
5 Hb_033363_080 0.1067551817 - - Allene oxide cyclase 3, chloroplast precursor, putative [Ricinus communis]
6 Hb_001454_300 0.1091076469 - - nucleotide binding protein, putative [Ricinus communis]
7 Hb_004774_060 0.1105150958 - - -
8 Hb_004055_180 0.1185777226 - - cell wall invertase [Manihot esculenta]
9 Hb_097908_010 0.1191647916 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X2 [Jatropha curcas]
10 Hb_012239_080 0.1238606956 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like [Jatropha curcas]
11 Hb_002048_010 0.1334511293 - - unknown [Lotus japonicus]
12 Hb_000563_610 0.1334955998 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Jatropha curcas]
13 Hb_148914_010 0.1366712596 - - glutathione s-transferase, putative [Ricinus communis]
14 Hb_000659_010 0.1422686769 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
15 Hb_001691_060 0.1426659869 - - lipoxygenase, putative [Ricinus communis]
16 Hb_001369_320 0.1453877215 - - PREDICTED: dynein light chain, cytoplasmic-like [Jatropha curcas]
17 Hb_009486_100 0.1462078382 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
18 Hb_000575_110 0.1470116534 - - S-locus-specific glycoprotein S13 precursor, putative [Ricinus communis]
19 Hb_011145_020 0.148607588 - - PREDICTED: metalloendoproteinase 1-like [Pyrus x bretschneideri]
20 Hb_004222_010 0.1487647014 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]

Gene co-expression network

sample Hb_004712_080 Hb_004712_080 Hb_012796_050 Hb_012796_050 Hb_004712_080--Hb_012796_050 Hb_175968_010 Hb_175968_010 Hb_004712_080--Hb_175968_010 Hb_001279_220 Hb_001279_220 Hb_004712_080--Hb_001279_220 Hb_033363_080 Hb_033363_080 Hb_004712_080--Hb_033363_080 Hb_001454_300 Hb_001454_300 Hb_004712_080--Hb_001454_300 Hb_004774_060 Hb_004774_060 Hb_004712_080--Hb_004774_060 Hb_148914_010 Hb_148914_010 Hb_012796_050--Hb_148914_010 Hb_002048_010 Hb_002048_010 Hb_012796_050--Hb_002048_010 Hb_002232_370 Hb_002232_370 Hb_012796_050--Hb_002232_370 Hb_000438_190 Hb_000438_190 Hb_012796_050--Hb_000438_190 Hb_012796_050--Hb_033363_080 Hb_175968_010--Hb_001279_220 Hb_175968_010--Hb_004774_060 Hb_000659_010 Hb_000659_010 Hb_175968_010--Hb_000659_010 Hb_004222_010 Hb_004222_010 Hb_175968_010--Hb_004222_010 Hb_097908_010 Hb_097908_010 Hb_175968_010--Hb_097908_010 Hb_004055_180 Hb_004055_180 Hb_175968_010--Hb_004055_180 Hb_001279_220--Hb_004774_060 Hb_001279_220--Hb_001454_300 Hb_001369_320 Hb_001369_320 Hb_001279_220--Hb_001369_320 Hb_001279_220--Hb_000659_010 Hb_033363_080--Hb_004774_060 Hb_011145_020 Hb_011145_020 Hb_033363_080--Hb_011145_020 Hb_033363_080--Hb_175968_010 Hb_033363_080--Hb_000438_190 Hb_033363_080--Hb_004055_180 Hb_001454_300--Hb_001369_320 Hb_001454_300--Hb_175968_010 Hb_001691_060 Hb_001691_060 Hb_001454_300--Hb_001691_060 Hb_001775_050 Hb_001775_050 Hb_001454_300--Hb_001775_050 Hb_004774_060--Hb_004055_180 Hb_004774_060--Hb_097908_010 Hb_004774_060--Hb_000659_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.404241 0.74804 0.368914 0.0520399 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0997326 0 0 6.47591 0.578813

CAGE analysis