Hb_004724_090

Information

Type -
Description -
Location Contig4724: 93076-93564
Sequence    

Annotation

kegg
ID rcu:RCOM_1281350
description hypothetical protein
nr
ID XP_012077854.1
description PREDICTED: uncharacterized protein LOC105638638 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KA65
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13573 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44328: 93021-93726
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004724_090 0.0 - - PREDICTED: uncharacterized protein LOC105638638 [Jatropha curcas]
2 Hb_000557_070 0.0297842852 - - S-locus-specific glycoprotein S13 precursor, putative [Ricinus communis]
3 Hb_004735_030 0.0415417606 - - PREDICTED: cytochrome P450 734A1 [Jatropha curcas]
4 Hb_006117_030 0.0438240136 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004993_020 0.051338111 - - PREDICTED: putative ribonuclease H protein At1g65750 [Beta vulgaris subsp. vulgaris]
6 Hb_000731_150 0.0524035711 - - PREDICTED: cytochrome P450 77A1 [Jatropha curcas]
7 Hb_001206_110 0.0526255051 - - PREDICTED: GDSL esterase/lipase At5g45910 [Jatropha curcas]
8 Hb_001141_180 0.0534270971 - - non-specific lipid-transfer protein-like protein At2g13820 precursor [Jatropha curcas]
9 Hb_001519_140 0.0542532815 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Vitis vinifera]
10 Hb_000777_080 0.0545663487 - - hypothetical protein POPTR_0015s15410g [Populus trichocarpa]
11 Hb_002743_010 0.055258054 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002043_020 0.055350915 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH87 [Jatropha curcas]
13 Hb_013394_070 0.0567801816 - - hypothetical protein POPTR_0013s12090g [Populus trichocarpa]
14 Hb_014056_020 0.0570605594 - - zinc finger protein, putative [Ricinus communis]
15 Hb_068580_010 0.0580340342 - - PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 isoform X2 [Populus euphratica]
16 Hb_002965_170 0.0592544899 transcription factor TF Family: MYB PREDICTED: myb-related protein P [Jatropha curcas]
17 Hb_001728_070 0.0614437999 - - PREDICTED: probable glycosyltransferase At3g07620 [Jatropha curcas]
18 Hb_001571_100 0.0630619934 - - chlorophyll A-B binding family protein [Populus trichocarpa]
19 Hb_001205_220 0.0647828948 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000915_210 0.0653862641 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_004724_090 Hb_004724_090 Hb_000557_070 Hb_000557_070 Hb_004724_090--Hb_000557_070 Hb_004735_030 Hb_004735_030 Hb_004724_090--Hb_004735_030 Hb_006117_030 Hb_006117_030 Hb_004724_090--Hb_006117_030 Hb_004993_020 Hb_004993_020 Hb_004724_090--Hb_004993_020 Hb_000731_150 Hb_000731_150 Hb_004724_090--Hb_000731_150 Hb_001206_110 Hb_001206_110 Hb_004724_090--Hb_001206_110 Hb_000557_070--Hb_006117_030 Hb_000557_070--Hb_004993_020 Hb_068580_010 Hb_068580_010 Hb_000557_070--Hb_068580_010 Hb_000557_070--Hb_000731_150 Hb_002743_010 Hb_002743_010 Hb_000557_070--Hb_002743_010 Hb_000777_080 Hb_000777_080 Hb_004735_030--Hb_000777_080 Hb_001141_180 Hb_001141_180 Hb_004735_030--Hb_001141_180 Hb_013394_070 Hb_013394_070 Hb_004735_030--Hb_013394_070 Hb_001728_070 Hb_001728_070 Hb_004735_030--Hb_001728_070 Hb_004735_030--Hb_001206_110 Hb_014056_020 Hb_014056_020 Hb_006117_030--Hb_014056_020 Hb_002965_170 Hb_002965_170 Hb_006117_030--Hb_002965_170 Hb_001205_140 Hb_001205_140 Hb_006117_030--Hb_001205_140 Hb_000915_210 Hb_000915_210 Hb_006117_030--Hb_000915_210 Hb_001519_140 Hb_001519_140 Hb_004993_020--Hb_001519_140 Hb_003086_140 Hb_003086_140 Hb_004993_020--Hb_003086_140 Hb_004993_020--Hb_068580_010 Hb_004993_020--Hb_000731_150 Hb_000010_160 Hb_000010_160 Hb_004993_020--Hb_000010_160 Hb_001205_220 Hb_001205_220 Hb_000731_150--Hb_001205_220 Hb_000731_150--Hb_002743_010 Hb_000731_150--Hb_001519_140 Hb_000731_150--Hb_068580_010 Hb_001206_110--Hb_001728_070 Hb_001206_110--Hb_000777_080 Hb_088689_010 Hb_088689_010 Hb_001206_110--Hb_088689_010 Hb_008173_160 Hb_008173_160 Hb_001206_110--Hb_008173_160 Hb_007894_200 Hb_007894_200 Hb_001206_110--Hb_007894_200 Hb_002973_100 Hb_002973_100 Hb_001206_110--Hb_002973_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.789341 187.387 96.3642 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.556968 0 0 0.0911419 182.301

CAGE analysis