Hb_004724_180

Information

Type -
Description -
Location Contig4724: 150167-151009
Sequence    

Annotation

kegg
ID rcu:RCOM_1281760
description hypothetical protein
nr
ID XP_012076118.1
description PREDICTED: protein FANTASTIC FOUR 1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KDV5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12692 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004724_180 0.0 - - PREDICTED: protein FANTASTIC FOUR 1 [Jatropha curcas]
2 Hb_000608_360 0.110749894 - - calreticulin, putative [Ricinus communis]
3 Hb_000640_330 0.1150590531 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000500_360 0.1421058531 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
5 Hb_000042_090 0.1479767111 desease resistance Gene Name: NB-ARC Disease resistance protein RPS2, putative [Ricinus communis]
6 Hb_000147_020 0.1493771141 - - PREDICTED: uncharacterized protein LOC105638303 [Jatropha curcas]
7 Hb_001172_150 0.1551357552 desease resistance Gene Name: ABC_membrane PREDICTED: putative ABC transporter C family member 15 [Jatropha curcas]
8 Hb_002276_030 0.1585249721 - - PREDICTED: putative U-box domain-containing protein 42 [Jatropha curcas]
9 Hb_008878_020 0.1591903393 - - PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Populus euphratica]
10 Hb_000049_170 0.1659237641 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001501_020 0.1663878855 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
12 Hb_001285_020 0.170266745 - - UDP-glucosyltransferase, putative [Ricinus communis]
13 Hb_001508_030 0.170381644 - - hypothetical protein VITISV_029808 [Vitis vinifera]
14 Hb_001244_050 0.1713992308 - - PREDICTED: uncharacterized protein LOC105643334 [Jatropha curcas]
15 Hb_003141_060 0.1718106176 transcription factor TF Family: TRAF PREDICTED: ETO1-like protein 1 [Jatropha curcas]
16 Hb_000116_330 0.1727550402 - - PREDICTED: glutamate receptor 3.6-like [Jatropha curcas]
17 Hb_003119_130 0.1779421249 - - hypothetical protein POPTR_0017s07770g [Populus trichocarpa]
18 Hb_010632_010 0.1800942717 - - PREDICTED: bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial [Jatropha curcas]
19 Hb_000853_050 0.1808693562 - - PREDICTED: putative GTP diphosphokinase RSH1, chloroplastic isoform X1 [Jatropha curcas]
20 Hb_001227_140 0.1815706015 - - PREDICTED: protein ROS1 [Jatropha curcas]

Gene co-expression network

sample Hb_004724_180 Hb_004724_180 Hb_000608_360 Hb_000608_360 Hb_004724_180--Hb_000608_360 Hb_000640_330 Hb_000640_330 Hb_004724_180--Hb_000640_330 Hb_000500_360 Hb_000500_360 Hb_004724_180--Hb_000500_360 Hb_000042_090 Hb_000042_090 Hb_004724_180--Hb_000042_090 Hb_000147_020 Hb_000147_020 Hb_004724_180--Hb_000147_020 Hb_001172_150 Hb_001172_150 Hb_004724_180--Hb_001172_150 Hb_003141_060 Hb_003141_060 Hb_000608_360--Hb_003141_060 Hb_000608_360--Hb_000640_330 Hb_006277_080 Hb_006277_080 Hb_000608_360--Hb_006277_080 Hb_001300_160 Hb_001300_160 Hb_000608_360--Hb_001300_160 Hb_002276_030 Hb_002276_030 Hb_000608_360--Hb_002276_030 Hb_000640_330--Hb_000147_020 Hb_000640_330--Hb_000042_090 Hb_000776_020 Hb_000776_020 Hb_000640_330--Hb_000776_020 Hb_000640_330--Hb_000500_360 Hb_000500_360--Hb_000147_020 Hb_001501_020 Hb_001501_020 Hb_000500_360--Hb_001501_020 Hb_009102_010 Hb_009102_010 Hb_000500_360--Hb_009102_010 Hb_000049_170 Hb_000049_170 Hb_000500_360--Hb_000049_170 Hb_002845_020 Hb_002845_020 Hb_000500_360--Hb_002845_020 Hb_001285_020 Hb_001285_020 Hb_000500_360--Hb_001285_020 Hb_003915_020 Hb_003915_020 Hb_000042_090--Hb_003915_020 Hb_003119_130 Hb_003119_130 Hb_000042_090--Hb_003119_130 Hb_000164_110 Hb_000164_110 Hb_000042_090--Hb_000164_110 Hb_000042_090--Hb_000147_020 Hb_000694_050 Hb_000694_050 Hb_000042_090--Hb_000694_050 Hb_006970_120 Hb_006970_120 Hb_000147_020--Hb_006970_120 Hb_004324_320 Hb_004324_320 Hb_000147_020--Hb_004324_320 Hb_000260_750 Hb_000260_750 Hb_000147_020--Hb_000260_750 Hb_000380_140 Hb_000380_140 Hb_000147_020--Hb_000380_140 Hb_000697_020 Hb_000697_020 Hb_001172_150--Hb_000697_020 Hb_001172_150--Hb_003119_130 Hb_008878_020 Hb_008878_020 Hb_001172_150--Hb_008878_020 Hb_000212_270 Hb_000212_270 Hb_001172_150--Hb_000212_270 Hb_061126_010 Hb_061126_010 Hb_001172_150--Hb_061126_010 Hb_000705_010 Hb_000705_010 Hb_001172_150--Hb_000705_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.260678 6.63116 20.1016 3.53616 0.517767 0.33926
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.188981 0.0990703 1.35028 11.7889 27.0828

CAGE analysis