Hb_004724_450

Information

Type -
Description -
Location Contig4724: 282403-285035
Sequence    

Annotation

kegg
ID rcu:RCOM_1282280
description hypothetical protein
nr
ID XP_012088443.1
description PREDICTED: uncharacterized protein LOC105647069 isoform X1 [Jatropha curcas]
swissprot
ID Q66GQ2
description Uncharacterized protein At5g41620 OS=Arabidopsis thaliana GN=At5g41620 PE=2 SV=2
trembl
ID A0A067JJ85
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26725 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44397: 284537-284959
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004724_450 0.0 - - PREDICTED: uncharacterized protein LOC105647069 isoform X1 [Jatropha curcas]
2 Hb_009736_010 0.1754796332 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002835_340 0.2088283946 - - PREDICTED: peroxisomal primary amine oxidase [Jatropha curcas]
4 Hb_000110_380 0.2105291623 - - PREDICTED: uncharacterized protein LOC105642019 [Jatropha curcas]
5 Hb_005408_070 0.2106647797 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP4 [Jatropha curcas]
6 Hb_003592_030 0.2130101784 - - PREDICTED: dCTP pyrophosphatase 1-like [Jatropha curcas]
7 Hb_001170_010 0.2195069513 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
8 Hb_000450_160 0.2297803324 - - hypothetical protein JCGZ_16746 [Jatropha curcas]
9 Hb_001675_030 0.233997841 - - conserved hypothetical protein [Ricinus communis]
10 Hb_030944_010 0.2346740645 - - PREDICTED: uncharacterized protein LOC105633455 [Jatropha curcas]
11 Hb_002539_040 0.2360718688 - - SPFH domain-containing protein 2 precursor, putative [Ricinus communis]
12 Hb_030982_060 0.2364247435 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004195_090 0.2375311382 - - PREDICTED: probable mitochondrial chaperone bcs1 [Jatropha curcas]
14 Hb_004899_310 0.2420371615 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000886_030 0.244906073 - - PREDICTED: uncharacterized protein LOC105113410 [Populus euphratica]
16 Hb_006922_090 0.2451311914 - - PREDICTED: interaptin [Jatropha curcas]
17 Hb_001366_060 0.2463411129 - - -
18 Hb_000567_180 0.2471825268 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF1.5 [Jatropha curcas]
19 Hb_002227_010 0.2475139853 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Populus euphratica]
20 Hb_010921_040 0.2499620514 transcription factor TF Family: PLATZ PREDICTED: uncharacterized protein LOC105634154 [Jatropha curcas]

Gene co-expression network

sample Hb_004724_450 Hb_004724_450 Hb_009736_010 Hb_009736_010 Hb_004724_450--Hb_009736_010 Hb_002835_340 Hb_002835_340 Hb_004724_450--Hb_002835_340 Hb_000110_380 Hb_000110_380 Hb_004724_450--Hb_000110_380 Hb_005408_070 Hb_005408_070 Hb_004724_450--Hb_005408_070 Hb_003592_030 Hb_003592_030 Hb_004724_450--Hb_003592_030 Hb_001170_010 Hb_001170_010 Hb_004724_450--Hb_001170_010 Hb_009545_020 Hb_009545_020 Hb_009736_010--Hb_009545_020 Hb_004195_090 Hb_004195_090 Hb_009736_010--Hb_004195_090 Hb_031527_060 Hb_031527_060 Hb_009736_010--Hb_031527_060 Hb_009736_010--Hb_001170_010 Hb_124315_030 Hb_124315_030 Hb_009736_010--Hb_124315_030 Hb_001975_040 Hb_001975_040 Hb_002835_340--Hb_001975_040 Hb_000317_420 Hb_000317_420 Hb_002835_340--Hb_000317_420 Hb_002835_340--Hb_003592_030 Hb_002539_040 Hb_002539_040 Hb_002835_340--Hb_002539_040 Hb_012807_130 Hb_012807_130 Hb_002835_340--Hb_012807_130 Hb_002660_120 Hb_002660_120 Hb_002835_340--Hb_002660_120 Hb_005813_010 Hb_005813_010 Hb_000110_380--Hb_005813_010 Hb_032225_030 Hb_032225_030 Hb_000110_380--Hb_032225_030 Hb_028001_020 Hb_028001_020 Hb_000110_380--Hb_028001_020 Hb_000110_380--Hb_002539_040 Hb_000110_380--Hb_001170_010 Hb_000110_380--Hb_005408_070 Hb_005408_070--Hb_002539_040 Hb_000567_180 Hb_000567_180 Hb_005408_070--Hb_000567_180 Hb_000175_470 Hb_000175_470 Hb_005408_070--Hb_000175_470 Hb_001054_090 Hb_001054_090 Hb_005408_070--Hb_001054_090 Hb_000645_200 Hb_000645_200 Hb_005408_070--Hb_000645_200 Hb_005408_070--Hb_005813_010 Hb_000116_590 Hb_000116_590 Hb_003592_030--Hb_000116_590 Hb_030982_060 Hb_030982_060 Hb_003592_030--Hb_030982_060 Hb_003592_030--Hb_009736_010 Hb_001439_110 Hb_001439_110 Hb_003592_030--Hb_001439_110 Hb_001170_010--Hb_032225_030 Hb_001170_010--Hb_004195_090 Hb_029921_030 Hb_029921_030 Hb_001170_010--Hb_029921_030 Hb_001170_010--Hb_030982_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00909782 0.918914 0.30556 2.5236 0.0346584 0.0325484
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.495975 1.59356 0.27809 1.94584 0.103326

CAGE analysis