Hb_004730_010

Information

Type transcription factor
Description TF Family: HB
Location Contig4730: 9193-10946
Sequence    

Annotation

kegg
ID tcc:TCM_016864
description Homeobox-leucine zipper protein HAT5
nr
ID XP_012081814.1
description PREDICTED: homeobox-leucine zipper protein HAT5 [Jatropha curcas]
swissprot
ID Q02283
description Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1
trembl
ID A0A067LDR0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09617 PE=4 SV=1
Gene Ontology
ID GO:0005634
description homeobox-leucine zipper protein hat5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004730_010 0.0 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT5 [Jatropha curcas]
2 Hb_105814_020 0.1021522492 - - berberine bridge enzyme [Hevea brasiliensis]
3 Hb_000041_160 0.1027209783 - - PREDICTED: uncharacterized protein LOC104907627 [Beta vulgaris subsp. vulgaris]
4 Hb_000813_090 0.1236542622 - - hypothetical protein CARUB_v10019318mg [Capsella rubella]
5 Hb_000015_230 0.1297370302 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF3.6-like isoform X2 [Populus euphratica]
6 Hb_123078_010 0.1315076024 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
7 Hb_027474_010 0.1324581298 - - PREDICTED: uncharacterized protein LOC105629982 [Jatropha curcas]
8 Hb_005588_130 0.134156949 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000342_120 0.1360358968 - - PREDICTED: probable protein phosphatase 2C 72 [Jatropha curcas]
10 Hb_009403_010 0.1433822623 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
11 Hb_000325_070 0.1476856598 - - ABC transporter family protein [Hevea brasiliensis]
12 Hb_001046_040 0.1522890334 - - UDP-glucosyltransferase, putative [Ricinus communis]
13 Hb_002335_010 0.1531507209 - - hypothetical protein JCGZ_23475 [Jatropha curcas]
14 Hb_026415_010 0.1560501892 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
15 Hb_001989_080 0.157052508 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_000974_030 0.1595213189 - - PREDICTED: uncharacterized protein LOC105128463 isoform X1 [Populus euphratica]
17 Hb_000956_100 0.1595384632 - - Cucumisin precursor, putative [Ricinus communis]
18 Hb_005271_180 0.1599971531 - - Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]
19 Hb_100526_020 0.160508999 - - hypothetical protein POPTR_0003s09340g [Populus trichocarpa]
20 Hb_044624_010 0.1651731109 - - -

Gene co-expression network

sample Hb_004730_010 Hb_004730_010 Hb_105814_020 Hb_105814_020 Hb_004730_010--Hb_105814_020 Hb_000041_160 Hb_000041_160 Hb_004730_010--Hb_000041_160 Hb_000813_090 Hb_000813_090 Hb_004730_010--Hb_000813_090 Hb_000015_230 Hb_000015_230 Hb_004730_010--Hb_000015_230 Hb_123078_010 Hb_123078_010 Hb_004730_010--Hb_123078_010 Hb_027474_010 Hb_027474_010 Hb_004730_010--Hb_027474_010 Hb_105814_020--Hb_123078_010 Hb_105814_020--Hb_000041_160 Hb_105814_020--Hb_027474_010 Hb_002267_030 Hb_002267_030 Hb_105814_020--Hb_002267_030 Hb_009403_010 Hb_009403_010 Hb_105814_020--Hb_009403_010 Hb_000041_160--Hb_123078_010 Hb_002335_010 Hb_002335_010 Hb_000041_160--Hb_002335_010 Hb_000041_160--Hb_027474_010 Hb_000956_100 Hb_000956_100 Hb_000041_160--Hb_000956_100 Hb_001046_040 Hb_001046_040 Hb_000813_090--Hb_001046_040 Hb_115114_010 Hb_115114_010 Hb_000813_090--Hb_115114_010 Hb_044624_010 Hb_044624_010 Hb_000813_090--Hb_044624_010 Hb_026415_010 Hb_026415_010 Hb_000813_090--Hb_026415_010 Hb_009557_080 Hb_009557_080 Hb_000813_090--Hb_009557_080 Hb_000813_090--Hb_000041_160 Hb_132259_010 Hb_132259_010 Hb_000015_230--Hb_132259_010 Hb_000015_230--Hb_115114_010 Hb_000325_070 Hb_000325_070 Hb_000015_230--Hb_000325_070 Hb_003073_040 Hb_003073_040 Hb_000015_230--Hb_003073_040 Hb_000015_230--Hb_000813_090 Hb_000140_220 Hb_000140_220 Hb_000015_230--Hb_000140_220 Hb_123078_010--Hb_027474_010 Hb_123078_010--Hb_002267_030 Hb_011101_010 Hb_011101_010 Hb_123078_010--Hb_011101_010 Hb_004218_290 Hb_004218_290 Hb_123078_010--Hb_004218_290 Hb_002097_210 Hb_002097_210 Hb_027474_010--Hb_002097_210 Hb_001989_080 Hb_001989_080 Hb_027474_010--Hb_001989_080 Hb_027474_010--Hb_001046_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0264071 4.24735 0.429475 2.46034 0.0742873 0.0233146
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.211778 2.41175

CAGE analysis