Hb_004735_050

Information

Type -
Description -
Location Contig4735: 81784-83952
Sequence    

Annotation

kegg
ID cic:CICLE_v10009973mg
description hypothetical protein
nr
ID XP_012078715.1
description PREDICTED: uncharacterized protein LOC105639312 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K7Z4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13281 PE=4 SV=1
Gene Ontology
ID GO:0005747
description PREDICTED: uncharacterized protein LOC105639312 isoform X2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44456: 81822-84199 , PASA_asmbl_44457: 82093-82522
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004735_050 0.0 - - PREDICTED: uncharacterized protein LOC105639312 isoform X2 [Jatropha curcas]
2 Hb_006588_080 0.0532992164 - - hypothetical protein JCGZ_25746 [Jatropha curcas]
3 Hb_004007_180 0.0872582019 - - PREDICTED: uncharacterized protein LOC105639838 [Jatropha curcas]
4 Hb_000635_080 0.087816263 - - 60S ribosomal protein L17A [Hevea brasiliensis]
5 Hb_000878_020 0.0925571561 - - PREDICTED: uncharacterized protein LOC105629937 [Jatropha curcas]
6 Hb_002316_120 0.093291753 - - hypothetical protein POPTR_0015s08460g [Populus trichocarpa]
7 Hb_008748_020 0.0942261409 - - hypothetical protein B456_005G210700 [Gossypium raimondii]
8 Hb_000300_390 0.0963257554 - - BTB/POZ domain-containing protein KCTD9, putative [Ricinus communis]
9 Hb_000172_420 0.0990977095 - - 60S ribosomal protein L30, putative [Ricinus communis]
10 Hb_000110_170 0.102171902 - - PREDICTED: arginine biosynthesis bifunctional protein ArgJ, chloroplastic isoform X1 [Jatropha curcas]
11 Hb_012395_130 0.1029794021 - - Os02g0814700 [Oryza sativa Japonica Group]
12 Hb_001386_050 0.103138165 - - PREDICTED: protein transport protein Sec61 subunit gamma-like [Jatropha curcas]
13 Hb_000915_120 0.1033600189 - - Peptidylprolyl cis/trans isomerase [Theobroma cacao]
14 Hb_000789_110 0.1047834161 - - RecName: Full=Profilin-1; AltName: Full=Pollen allergen Hev b 8.0101; AltName: Allergen=Hev b 8.0101 [Hevea brasiliensis]
15 Hb_004545_130 0.1076330156 - - uncharacterized protein LOC100305465 [Glycine max]
16 Hb_011377_020 0.1106410577 - - hypothetical protein CARUB_v10018269mg, partial [Capsella rubella]
17 Hb_002248_100 0.1106598521 - - hypothetical protein VITISV_027197 [Vitis vinifera]
18 Hb_001780_050 0.111151637 - - PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2 [Jatropha curcas]
19 Hb_120823_010 0.1116077599 - - -
20 Hb_000454_180 0.11169935 - - PREDICTED: uncharacterized protein LOC105134496 [Populus euphratica]

Gene co-expression network

sample Hb_004735_050 Hb_004735_050 Hb_006588_080 Hb_006588_080 Hb_004735_050--Hb_006588_080 Hb_004007_180 Hb_004007_180 Hb_004735_050--Hb_004007_180 Hb_000635_080 Hb_000635_080 Hb_004735_050--Hb_000635_080 Hb_000878_020 Hb_000878_020 Hb_004735_050--Hb_000878_020 Hb_002316_120 Hb_002316_120 Hb_004735_050--Hb_002316_120 Hb_008748_020 Hb_008748_020 Hb_004735_050--Hb_008748_020 Hb_006588_080--Hb_000878_020 Hb_006588_080--Hb_000635_080 Hb_120823_010 Hb_120823_010 Hb_006588_080--Hb_120823_010 Hb_006588_080--Hb_002316_120 Hb_000172_420 Hb_000172_420 Hb_006588_080--Hb_000172_420 Hb_000270_720 Hb_000270_720 Hb_004007_180--Hb_000270_720 Hb_004007_180--Hb_002316_120 Hb_000599_280 Hb_000599_280 Hb_004007_180--Hb_000599_280 Hb_004007_180--Hb_006588_080 Hb_000789_110 Hb_000789_110 Hb_004007_180--Hb_000789_110 Hb_001377_380 Hb_001377_380 Hb_000635_080--Hb_001377_380 Hb_000780_210 Hb_000780_210 Hb_000635_080--Hb_000780_210 Hb_002248_100 Hb_002248_100 Hb_000635_080--Hb_002248_100 Hb_004545_130 Hb_004545_130 Hb_000635_080--Hb_004545_130 Hb_000635_080--Hb_002316_120 Hb_000110_170 Hb_000110_170 Hb_000878_020--Hb_000110_170 Hb_001386_050 Hb_001386_050 Hb_000878_020--Hb_001386_050 Hb_008948_050 Hb_008948_050 Hb_000878_020--Hb_008948_050 Hb_002344_070 Hb_002344_070 Hb_000878_020--Hb_002344_070 Hb_000915_120 Hb_000915_120 Hb_000878_020--Hb_000915_120 Hb_002316_120--Hb_000789_110 Hb_000300_390 Hb_000300_390 Hb_002316_120--Hb_000300_390 Hb_002316_120--Hb_000270_720 Hb_002316_120--Hb_001377_380 Hb_012539_020 Hb_012539_020 Hb_002316_120--Hb_012539_020 Hb_005914_200 Hb_005914_200 Hb_008748_020--Hb_005914_200 Hb_000025_240 Hb_000025_240 Hb_008748_020--Hb_000025_240 Hb_004754_070 Hb_004754_070 Hb_008748_020--Hb_004754_070 Hb_006541_020 Hb_006541_020 Hb_008748_020--Hb_006541_020 Hb_008748_020--Hb_004007_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.6913 8.44592 11.3064 28.804 8.35197 23.8564
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
76.8729 190.689 48.0392 24.6664 8.00208

CAGE analysis