Hb_004738_100

Information

Type -
Description -
Location Contig4738: 106510-109790
Sequence    

Annotation

kegg
ID cit:102608475
description 14-3-3-like protein D-like
nr
ID XP_006469020.1
description PREDICTED: 14-3-3-like protein D-like isoform X1 [Citrus sinensis]
swissprot
ID Q96453
description 14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1
trembl
ID A0A067FIS3
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024539mg PE=3 SV=1
Gene Ontology
ID GO:0005634
description 14-3-3-like protein d

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44469: 106395-109907
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004738_100 0.0 - - PREDICTED: 14-3-3-like protein D-like isoform X1 [Citrus sinensis]
2 Hb_092337_010 0.0551691311 - - PREDICTED: actin-depolymerizing factor 2-like [Nelumbo nucifera]
3 Hb_007416_320 0.0776819015 - - conserved hypothetical protein [Ricinus communis]
4 Hb_155159_020 0.0777115156 - - PREDICTED: clathrin light chain 1-like [Jatropha curcas]
5 Hb_003092_040 0.0829857159 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 3 isoform X2 [Pyrus x bretschneideri]
6 Hb_002631_060 0.0839767479 - - PREDICTED: uncharacterized protein LOC105646151 [Jatropha curcas]
7 Hb_002105_040 0.0847300028 - - -
8 Hb_000005_080 0.0860494373 - - PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Elaeis guineensis]
9 Hb_000705_210 0.0869866771 - - PREDICTED: ras-related protein Rab2BV [Jatropha curcas]
10 Hb_001488_070 0.0877222076 - - conserved hypothetical protein [Ricinus communis]
11 Hb_005618_170 0.0880291259 - - PREDICTED: protein transport protein SEC23 [Jatropha curcas]
12 Hb_000417_040 0.0890710206 - - PREDICTED: 2-aminoethanethiol dioxygenase-like [Jatropha curcas]
13 Hb_000510_320 0.0891292005 - - PREDICTED: uncharacterized protein LOC105649907 [Jatropha curcas]
14 Hb_010128_080 0.0897367902 - - PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like isoform X1 [Jatropha curcas]
15 Hb_032208_090 0.0897508735 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit [Jatropha curcas]
16 Hb_005686_060 0.0900729715 - - PREDICTED: uncharacterized protein LOC101508199 [Cicer arietinum]
17 Hb_004705_100 0.0908688796 - - PREDICTED: inactive leucine-rich repeat receptor-like protein kinase CORYNE [Jatropha curcas]
18 Hb_000579_140 0.0920639053 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003108_020 0.0929060533 - - PREDICTED: transmembrane protein 18 [Jatropha curcas]
20 Hb_005784_110 0.0933527175 - - PREDICTED: dolichol-phosphate mannosyltransferase-like isoform X1 [Citrus sinensis]

Gene co-expression network

sample Hb_004738_100 Hb_004738_100 Hb_092337_010 Hb_092337_010 Hb_004738_100--Hb_092337_010 Hb_007416_320 Hb_007416_320 Hb_004738_100--Hb_007416_320 Hb_155159_020 Hb_155159_020 Hb_004738_100--Hb_155159_020 Hb_003092_040 Hb_003092_040 Hb_004738_100--Hb_003092_040 Hb_002631_060 Hb_002631_060 Hb_004738_100--Hb_002631_060 Hb_002105_040 Hb_002105_040 Hb_004738_100--Hb_002105_040 Hb_000692_220 Hb_000692_220 Hb_092337_010--Hb_000692_220 Hb_001936_010 Hb_001936_010 Hb_092337_010--Hb_001936_010 Hb_003108_020 Hb_003108_020 Hb_092337_010--Hb_003108_020 Hb_004705_100 Hb_004705_100 Hb_092337_010--Hb_004705_100 Hb_000125_100 Hb_000125_100 Hb_092337_010--Hb_000125_100 Hb_005618_170 Hb_005618_170 Hb_007416_320--Hb_005618_170 Hb_001633_210 Hb_001633_210 Hb_007416_320--Hb_001633_210 Hb_000058_060 Hb_000058_060 Hb_007416_320--Hb_000058_060 Hb_000062_220 Hb_000062_220 Hb_007416_320--Hb_000062_220 Hb_000876_070 Hb_000876_070 Hb_007416_320--Hb_000876_070 Hb_000120_470 Hb_000120_470 Hb_007416_320--Hb_000120_470 Hb_001159_130 Hb_001159_130 Hb_155159_020--Hb_001159_130 Hb_022115_020 Hb_022115_020 Hb_155159_020--Hb_022115_020 Hb_084646_010 Hb_084646_010 Hb_155159_020--Hb_084646_010 Hb_000116_270 Hb_000116_270 Hb_155159_020--Hb_000116_270 Hb_000603_150 Hb_000603_150 Hb_155159_020--Hb_000603_150 Hb_000787_020 Hb_000787_020 Hb_155159_020--Hb_000787_020 Hb_007416_280 Hb_007416_280 Hb_003092_040--Hb_007416_280 Hb_005663_060 Hb_005663_060 Hb_003092_040--Hb_005663_060 Hb_000510_130 Hb_000510_130 Hb_003092_040--Hb_000510_130 Hb_007691_030 Hb_007691_030 Hb_003092_040--Hb_007691_030 Hb_032202_190 Hb_032202_190 Hb_003092_040--Hb_032202_190 Hb_003126_050 Hb_003126_050 Hb_003092_040--Hb_003126_050 Hb_010883_090 Hb_010883_090 Hb_002631_060--Hb_010883_090 Hb_004907_110 Hb_004907_110 Hb_002631_060--Hb_004907_110 Hb_003376_350 Hb_003376_350 Hb_002631_060--Hb_003376_350 Hb_002631_060--Hb_007416_320 Hb_000260_270 Hb_000260_270 Hb_002631_060--Hb_000260_270 Hb_000395_190 Hb_000395_190 Hb_002631_060--Hb_000395_190 Hb_000175_460 Hb_000175_460 Hb_002105_040--Hb_000175_460 Hb_005348_140 Hb_005348_140 Hb_002105_040--Hb_005348_140 Hb_000510_320 Hb_000510_320 Hb_002105_040--Hb_000510_320 Hb_002105_040--Hb_005663_060 Hb_002105_040--Hb_000876_070 Hb_004724_080 Hb_004724_080 Hb_002105_040--Hb_004724_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
141.374 90.4926 56.9939 147.655 100.236 134.636
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
151.951 188.535 208.584 120.797 45.2535

CAGE analysis