Hb_004770_040

Information

Type -
Description -
Location Contig4770: 95347-98736
Sequence    

Annotation

kegg
ID egr:104446234
description serine carboxypeptidase-like 31
nr
ID XP_010058416.1
description PREDICTED: serine carboxypeptidase-like 31 [Eucalyptus grandis]
swissprot
ID -
description -
trembl
ID A0A0E0K2R1
description Uncharacterized protein OS=Oryza punctata PE=4 SV=1
Gene Ontology
ID GO:0004185
description serine carboxypeptidase-like 35

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004770_040 0.0 - - PREDICTED: serine carboxypeptidase-like 31 [Eucalyptus grandis]
2 Hb_006508_030 0.2209252767 - - PREDICTED: CDPK-related kinase 1-like [Jatropha curcas]
3 Hb_012528_030 0.2227920059 - - -
4 Hb_000984_250 0.2229577591 - - PREDICTED: uncharacterized protein LOC105630783 [Jatropha curcas]
5 Hb_176368_010 0.2235771905 - - hypothetical protein POPTR_0019s00300g [Populus trichocarpa]
6 Hb_000859_050 0.2268893632 - - hypothetical protein JCGZ_17054 [Jatropha curcas]
7 Hb_004195_060 0.2302190999 - - PREDICTED: uncharacterized protein LOC105803780 isoform X1 [Gossypium raimondii]
8 Hb_000221_120 0.2377880568 - - PREDICTED: uncharacterized protein At1g04910 isoform X2 [Jatropha curcas]
9 Hb_059464_010 0.2383079725 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004545_170 0.2420407379 - - PREDICTED: autophagy-related protein 18h [Jatropha curcas]
11 Hb_007456_040 0.2428134103 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [Jatropha curcas]
12 Hb_000384_080 0.2437535195 - - PREDICTED: RING-H2 finger protein ATL7-like isoform X2 [Jatropha curcas]
13 Hb_001511_170 0.2440979467 - - PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Jatropha curcas]
14 Hb_001952_130 0.2442221555 - - PREDICTED: protein EXORDIUM-like 2 [Jatropha curcas]
15 Hb_001452_220 0.2487368685 - - PREDICTED: molybdopterin biosynthesis protein CNX1 [Jatropha curcas]
16 Hb_001080_130 0.2520863124 - - catalase [Hevea brasiliensis]
17 Hb_001198_150 0.2524097414 - - hypothetical protein POPTR_0003s01280g [Populus trichocarpa]
18 Hb_012528_020 0.2529220546 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2 [Jatropha curcas]
19 Hb_000106_020 0.254539942 - - PREDICTED: protein TOPLESS isoform X1 [Jatropha curcas]
20 Hb_011639_040 0.2570339202 - - hypothetical protein M569_08265, partial [Genlisea aurea]

Gene co-expression network

sample Hb_004770_040 Hb_004770_040 Hb_006508_030 Hb_006508_030 Hb_004770_040--Hb_006508_030 Hb_012528_030 Hb_012528_030 Hb_004770_040--Hb_012528_030 Hb_000984_250 Hb_000984_250 Hb_004770_040--Hb_000984_250 Hb_176368_010 Hb_176368_010 Hb_004770_040--Hb_176368_010 Hb_000859_050 Hb_000859_050 Hb_004770_040--Hb_000859_050 Hb_004195_060 Hb_004195_060 Hb_004770_040--Hb_004195_060 Hb_002814_060 Hb_002814_060 Hb_006508_030--Hb_002814_060 Hb_018202_050 Hb_018202_050 Hb_006508_030--Hb_018202_050 Hb_000384_080 Hb_000384_080 Hb_006508_030--Hb_000384_080 Hb_001369_350 Hb_001369_350 Hb_006508_030--Hb_001369_350 Hb_012528_020 Hb_012528_020 Hb_006508_030--Hb_012528_020 Hb_000261_100 Hb_000261_100 Hb_006508_030--Hb_000261_100 Hb_012528_030--Hb_012528_020 Hb_000327_080 Hb_000327_080 Hb_012528_030--Hb_000327_080 Hb_021537_010 Hb_021537_010 Hb_012528_030--Hb_021537_010 Hb_012528_030--Hb_176368_010 Hb_004254_100 Hb_004254_100 Hb_012528_030--Hb_004254_100 Hb_009449_090 Hb_009449_090 Hb_012528_030--Hb_009449_090 Hb_001952_130 Hb_001952_130 Hb_000984_250--Hb_001952_130 Hb_006915_020 Hb_006915_020 Hb_000984_250--Hb_006915_020 Hb_000789_130 Hb_000789_130 Hb_000984_250--Hb_000789_130 Hb_010531_050 Hb_010531_050 Hb_000984_250--Hb_010531_050 Hb_000733_050 Hb_000733_050 Hb_000984_250--Hb_000733_050 Hb_013016_020 Hb_013016_020 Hb_000984_250--Hb_013016_020 Hb_176368_010--Hb_000859_050 Hb_008103_080 Hb_008103_080 Hb_176368_010--Hb_008103_080 Hb_000445_300 Hb_000445_300 Hb_176368_010--Hb_000445_300 Hb_176368_010--Hb_000327_080 Hb_003739_030 Hb_003739_030 Hb_176368_010--Hb_003739_030 Hb_000922_140 Hb_000922_140 Hb_176368_010--Hb_000922_140 Hb_000859_050--Hb_008103_080 Hb_005333_160 Hb_005333_160 Hb_000859_050--Hb_005333_160 Hb_001511_170 Hb_001511_170 Hb_000859_050--Hb_001511_170 Hb_000859_050--Hb_003739_030 Hb_000859_050--Hb_000922_140 Hb_171900_070 Hb_171900_070 Hb_000859_050--Hb_171900_070 Hb_000589_040 Hb_000589_040 Hb_004195_060--Hb_000589_040 Hb_030627_060 Hb_030627_060 Hb_004195_060--Hb_030627_060 Hb_111985_080 Hb_111985_080 Hb_004195_060--Hb_111985_080 Hb_004970_160 Hb_004970_160 Hb_004195_060--Hb_004970_160 Hb_010417_060 Hb_010417_060 Hb_004195_060--Hb_010417_060 Hb_000504_150 Hb_000504_150 Hb_004195_060--Hb_000504_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.284181 0.0817462 0.104032 0.0914548 0.316826 0.127311
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.062128 0 0 0.31574 0.197321

CAGE analysis