Hb_004785_090

Information

Type -
Description -
Location Contig4785: 110050-111376
Sequence    

Annotation

kegg
ID smo:SELMODRAFT_405021
description hypothetical protein
nr
ID EYU33497.1
description hypothetical protein MIMGU_mgv1a018797mg [Erythranthe guttata]
swissprot
ID -
description -
trembl
ID A0A022QY01
description Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a018797mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44558: 109983-111404 , PASA_asmbl_44559: 110018-111147 , PASA_asmbl_44560: 110020-111147
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004785_090 0.0 - - hypothetical protein MIMGU_mgv1a018797mg [Erythranthe guttata]
2 Hb_164117_010 0.12523561 - - hypothetical protein PHAVU_004G0480000g [Phaseolus vulgaris]
3 Hb_085315_010 0.135867169 - - PREDICTED: uncharacterized protein LOC105632092 [Jatropha curcas]
4 Hb_116194_010 0.1368591605 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
5 Hb_001430_090 0.1429550661 - - hypothetical protein JCGZ_05131 [Jatropha curcas]
6 Hb_000127_080 0.1454911971 - - hypothetical protein POPTR_0005s21760g [Populus trichocarpa]
7 Hb_020805_190 0.148844827 transcription factor TF Family: HB DNA binding protein, putative [Ricinus communis]
8 Hb_001971_050 0.1534700936 - - WD-repeat protein, putative [Ricinus communis]
9 Hb_000254_060 0.1556849043 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001663_120 0.156720511 - - PREDICTED: formin-like protein 1 isoform X1 [Jatropha curcas]
11 Hb_002814_050 0.1570284492 - - PREDICTED: sugar carrier protein A [Jatropha curcas]
12 Hb_003398_090 0.1571281273 - - PREDICTED: expansin-A4 [Jatropha curcas]
13 Hb_029510_090 0.1623885405 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
14 Hb_003983_010 0.1679305127 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]
15 Hb_078361_010 0.171829264 - - PREDICTED: AT-hook motif nuclear-localized protein 1 [Jatropha curcas]
16 Hb_000120_880 0.1729007403 - - PREDICTED: disease resistance response protein 206-like [Jatropha curcas]
17 Hb_179138_010 0.1729061271 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
18 Hb_011849_020 0.1735725816 - - dioxygenase family protein [Populus trichocarpa]
19 Hb_000163_010 0.1740216434 - - hypothetical protein JCGZ_13952 [Jatropha curcas]
20 Hb_003092_050 0.1758273108 - - PREDICTED: putative chloride channel-like protein CLC-g [Jatropha curcas]

Gene co-expression network

sample Hb_004785_090 Hb_004785_090 Hb_164117_010 Hb_164117_010 Hb_004785_090--Hb_164117_010 Hb_085315_010 Hb_085315_010 Hb_004785_090--Hb_085315_010 Hb_116194_010 Hb_116194_010 Hb_004785_090--Hb_116194_010 Hb_001430_090 Hb_001430_090 Hb_004785_090--Hb_001430_090 Hb_000127_080 Hb_000127_080 Hb_004785_090--Hb_000127_080 Hb_020805_190 Hb_020805_190 Hb_004785_090--Hb_020805_190 Hb_164117_010--Hb_085315_010 Hb_032260_130 Hb_032260_130 Hb_164117_010--Hb_032260_130 Hb_004893_010 Hb_004893_010 Hb_164117_010--Hb_004893_010 Hb_164117_010--Hb_116194_010 Hb_019026_050 Hb_019026_050 Hb_164117_010--Hb_019026_050 Hb_164117_010--Hb_000127_080 Hb_008727_040 Hb_008727_040 Hb_085315_010--Hb_008727_040 Hb_006846_030 Hb_006846_030 Hb_085315_010--Hb_006846_030 Hb_012787_050 Hb_012787_050 Hb_085315_010--Hb_012787_050 Hb_085315_010--Hb_004893_010 Hb_085315_010--Hb_000127_080 Hb_116194_010--Hb_032260_130 Hb_000115_290 Hb_000115_290 Hb_116194_010--Hb_000115_290 Hb_002042_160 Hb_002042_160 Hb_116194_010--Hb_002042_160 Hb_002814_050 Hb_002814_050 Hb_116194_010--Hb_002814_050 Hb_003398_090 Hb_003398_090 Hb_001430_090--Hb_003398_090 Hb_002900_040 Hb_002900_040 Hb_001430_090--Hb_002900_040 Hb_000393_030 Hb_000393_030 Hb_001430_090--Hb_000393_030 Hb_003913_060 Hb_003913_060 Hb_001430_090--Hb_003913_060 Hb_000163_010 Hb_000163_010 Hb_001430_090--Hb_000163_010 Hb_130563_010 Hb_130563_010 Hb_001430_090--Hb_130563_010 Hb_004282_010 Hb_004282_010 Hb_000127_080--Hb_004282_010 Hb_006501_100 Hb_006501_100 Hb_000127_080--Hb_006501_100 Hb_000956_070 Hb_000956_070 Hb_000127_080--Hb_000956_070 Hb_007632_130 Hb_007632_130 Hb_000127_080--Hb_007632_130 Hb_020805_190--Hb_001430_090 Hb_020805_190--Hb_116194_010 Hb_020805_190--Hb_002042_160 Hb_020805_190--Hb_002900_040 Hb_020805_190--Hb_085315_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
46.1868 260.775 122.391 1296.21 30.5455 32.0762
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.06433 1.20514 1.77192 1253.85 843.998

CAGE analysis