Hb_004785_150

Information

Type -
Description -
Location Contig4785: 208980-209210
Sequence    

Annotation

kegg
ID gmx:102668399
description protein IDA-LIKE 2-like
nr
ID KDP43021.1
description hypothetical protein JCGZ_25207 [Jatropha curcas]
swissprot
ID Q6DUW9
description Protein IDA-LIKE 2 OS=Arabidopsis thaliana GN=IDL2 PE=2 SV=1
trembl
ID A0A067L3H4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25207 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004785_150 0.0 - - hypothetical protein JCGZ_25207 [Jatropha curcas]
2 Hb_000329_570 0.0556478477 - - -
3 Hb_000743_070 0.0637897835 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21060 [Jatropha curcas]
4 Hb_020112_010 0.0780027883 - - acyltransferase, putative [Ricinus communis]
5 Hb_000496_080 0.0908276412 - - Proteinase inhibitor, putative [Ricinus communis]
6 Hb_010308_010 0.0918017332 - - hypothetical protein JCGZ_22818 [Jatropha curcas]
7 Hb_001300_060 0.0929052247 - - PREDICTED: monothiol glutaredoxin-S6-like [Jatropha curcas]
8 Hb_004330_050 0.0968067397 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000127_050 0.1115820807 - - -
10 Hb_160814_010 0.1143480558 - - PREDICTED: probable sulfate transporter 3.5 isoform X1 [Jatropha curcas]
11 Hb_000705_110 0.1254794086 - - hypothetical protein POPTR_0005s09220g [Populus trichocarpa]
12 Hb_003177_100 0.1286356789 - - PREDICTED: auxin-induced protein 6B [Jatropha curcas]
13 Hb_000147_010 0.1342229219 - - PREDICTED: UDP-glycosyltransferase 87A1-like [Jatropha curcas]
14 Hb_023714_010 0.1460284071 - - hypothetical protein B456_007G377100 [Gossypium raimondii]
15 Hb_006275_040 0.1520432302 - - PREDICTED: V-type proton ATPase subunit a3-like [Jatropha curcas]
16 Hb_001863_520 0.1605614114 - - conserved hypothetical protein [Ricinus communis]
17 Hb_081191_010 0.1620919622 - - PREDICTED: pathogenesis-related protein PR-1-like [Jatropha curcas]
18 Hb_000046_550 0.1633741523 - - PREDICTED: protein ALWAYS EARLY 3 isoform X2 [Jatropha curcas]
19 Hb_005551_070 0.168088088 - - PREDICTED: uncharacterized protein LOC105635822 isoform X1 [Jatropha curcas]
20 Hb_005305_170 0.1698029359 - - PREDICTED: probable beta-1,3-galactosyltransferase 8 [Jatropha curcas]

Gene co-expression network

sample Hb_004785_150 Hb_004785_150 Hb_000329_570 Hb_000329_570 Hb_004785_150--Hb_000329_570 Hb_000743_070 Hb_000743_070 Hb_004785_150--Hb_000743_070 Hb_020112_010 Hb_020112_010 Hb_004785_150--Hb_020112_010 Hb_000496_080 Hb_000496_080 Hb_004785_150--Hb_000496_080 Hb_010308_010 Hb_010308_010 Hb_004785_150--Hb_010308_010 Hb_001300_060 Hb_001300_060 Hb_004785_150--Hb_001300_060 Hb_000329_570--Hb_001300_060 Hb_000329_570--Hb_020112_010 Hb_000329_570--Hb_000496_080 Hb_000329_570--Hb_010308_010 Hb_004330_050 Hb_004330_050 Hb_000329_570--Hb_004330_050 Hb_000127_050 Hb_000127_050 Hb_000743_070--Hb_000127_050 Hb_000743_070--Hb_020112_010 Hb_000743_070--Hb_000496_080 Hb_000743_070--Hb_010308_010 Hb_000743_070--Hb_004330_050 Hb_020112_010--Hb_000496_080 Hb_020112_010--Hb_010308_010 Hb_020112_010--Hb_004330_050 Hb_020112_010--Hb_001300_060 Hb_000496_080--Hb_010308_010 Hb_000496_080--Hb_004330_050 Hb_000496_080--Hb_001300_060 Hb_010308_010--Hb_004330_050 Hb_010308_010--Hb_001300_060 Hb_001300_060--Hb_004330_050 Hb_006275_040 Hb_006275_040 Hb_001300_060--Hb_006275_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.394977 1.78661 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.22684 0

CAGE analysis