Hb_004818_010

Information

Type -
Description -
Location Contig4818: 8247-15404
Sequence    

Annotation

kegg
ID rcu:RCOM_0678010
description Amine oxidase [copper-containing] precursor, putative
nr
ID KDP33042.1
description hypothetical protein JCGZ_13628 [Jatropha curcas]
swissprot
ID Q43077
description Primary amine oxidase OS=Pisum sativum PE=1 SV=1
trembl
ID A0A067KA86
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13628 PE=3 SV=1
Gene Ontology
ID GO:0005507
description primary amine oxidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004818_010 0.0 - - hypothetical protein JCGZ_13628 [Jatropha curcas]
2 Hb_003093_050 0.0317428351 - - PREDICTED: uncharacterized protein LOC105641023 isoform X2 [Jatropha curcas]
3 Hb_000704_020 0.0332526991 - - conserved hypothetical protein [Ricinus communis]
4 Hb_004143_080 0.0466322149 - - PREDICTED: protein ECERIFERUM 1 [Jatropha curcas]
5 Hb_029584_020 0.0481305888 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000530_060 0.0497427878 - - -
7 Hb_000815_120 0.0501754509 - - calcium ion binding protein, putative [Ricinus communis]
8 Hb_000629_110 0.0506913775 - - PREDICTED: protein RTF2 homolog [Jatropha curcas]
9 Hb_158597_010 0.054329434 - - PREDICTED: serine hydroxymethyltransferase, mitochondrial [Jatropha curcas]
10 Hb_081344_010 0.0570256599 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
11 Hb_001951_050 0.0586474738 - - chlorophyll A/B binding protein, putative [Ricinus communis]
12 Hb_001097_110 0.058784487 - - gibberellin 20-oxidase, putative [Ricinus communis]
13 Hb_000433_040 0.0588381111 - - -
14 Hb_003805_110 0.0602780712 - - PREDICTED: laccase-11-like [Jatropha curcas]
15 Hb_001089_120 0.0633130515 - - PREDICTED: pectinesterase [Jatropha curcas]
16 Hb_000152_300 0.0634940642 - - Aspartic proteinase Asp1 precursor, putative [Ricinus communis]
17 Hb_010666_020 0.0659976067 - - hypothetical protein JCGZ_04276 [Jatropha curcas]
18 Hb_000608_160 0.0660472353 transcription factor TF Family: GNAT N-acetyltransferase, putative [Ricinus communis]
19 Hb_001140_110 0.0677556512 - - hypothetical protein JCGZ_26123 [Jatropha curcas]
20 Hb_005736_030 0.0696255344 - - thioredoxin m(mitochondrial)-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_004818_010 Hb_004818_010 Hb_003093_050 Hb_003093_050 Hb_004818_010--Hb_003093_050 Hb_000704_020 Hb_000704_020 Hb_004818_010--Hb_000704_020 Hb_004143_080 Hb_004143_080 Hb_004818_010--Hb_004143_080 Hb_029584_020 Hb_029584_020 Hb_004818_010--Hb_029584_020 Hb_000530_060 Hb_000530_060 Hb_004818_010--Hb_000530_060 Hb_000815_120 Hb_000815_120 Hb_004818_010--Hb_000815_120 Hb_003093_050--Hb_029584_020 Hb_000629_110 Hb_000629_110 Hb_003093_050--Hb_000629_110 Hb_003093_050--Hb_004143_080 Hb_003093_050--Hb_000530_060 Hb_003093_050--Hb_000704_020 Hb_000704_020--Hb_004143_080 Hb_000704_020--Hb_000815_120 Hb_158597_010 Hb_158597_010 Hb_000704_020--Hb_158597_010 Hb_000704_020--Hb_000629_110 Hb_004143_080--Hb_000815_120 Hb_002301_070 Hb_002301_070 Hb_004143_080--Hb_002301_070 Hb_001951_050 Hb_001951_050 Hb_004143_080--Hb_001951_050 Hb_029584_020--Hb_000530_060 Hb_003805_110 Hb_003805_110 Hb_029584_020--Hb_003805_110 Hb_081344_010 Hb_081344_010 Hb_029584_020--Hb_081344_010 Hb_000433_040 Hb_000433_040 Hb_029584_020--Hb_000433_040 Hb_000152_300 Hb_000152_300 Hb_029584_020--Hb_000152_300 Hb_010666_020 Hb_010666_020 Hb_029584_020--Hb_010666_020 Hb_001089_120 Hb_001089_120 Hb_000530_060--Hb_001089_120 Hb_000530_060--Hb_003805_110 Hb_000504_220 Hb_000504_220 Hb_000530_060--Hb_000504_220 Hb_000815_120--Hb_001951_050 Hb_000815_120--Hb_002301_070 Hb_000815_120--Hb_003093_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.117496 4.71483 4.72857 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0442771 0 0 0 28.7659

CAGE analysis