Hb_004846_100

Information

Type -
Description -
Location Contig4846: 150707-153547
Sequence    

Annotation

kegg
ID rcu:RCOM_0633330
description Na(+)/H(+) antiporter, putative
nr
ID XP_002519710.1
description Na(+)/H(+) antiporter, putative [Ricinus communis]
swissprot
ID Q9SIT5
description Cation/H(+) antiporter 15 OS=Arabidopsis thaliana GN=CHX15 PE=2 SV=1
trembl
ID B9S141
description Na(+)/H(+) antiporter, putative OS=Ricinus communis GN=RCOM_0633330 PE=4 SV=1
Gene Ontology
ID GO:0016021
description cation h(+) antiporter 15

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004846_100 0.0 - - Na(+)/H(+) antiporter, putative [Ricinus communis]
2 Hb_155541_010 0.2346313684 - - -
3 Hb_001862_120 0.2374190729 - - PREDICTED: aspartic proteinase-like protein 2 [Jatropha curcas]
4 Hb_000743_030 0.2384144978 - - NmrA-like negative transcriptional regulator family protein [Theobroma cacao]
5 Hb_010913_010 0.2425946532 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
6 Hb_000275_020 0.2453630109 - - PREDICTED: uncharacterized protein LOC105632656 [Jatropha curcas]
7 Hb_001005_160 0.2459461652 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000099_230 0.2517152742 - - PREDICTED: F-box protein SKIP19-like [Gossypium raimondii]
9 Hb_003106_220 0.2569504285 - - PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like isoform X1 [Jatropha curcas]
10 Hb_000224_200 0.2577092815 - - PREDICTED: uncharacterized protein LOC105640874 [Jatropha curcas]
11 Hb_019516_020 0.2590435994 - - conserved hypothetical protein [Ricinus communis]
12 Hb_003758_020 0.2608872498 - - UGTPg34 [Panax ginseng]
13 Hb_001114_160 0.2627187002 - - PREDICTED: beta carbonic anhydrase 5, chloroplastic [Jatropha curcas]
14 Hb_000720_160 0.2651343754 - - PREDICTED: C2 domain-containing protein At1g63220 [Jatropha curcas]
15 Hb_013399_010 0.2658615277 - - PREDICTED: uncharacterized protein LOC105631404 isoform X2 [Jatropha curcas]
16 Hb_011485_090 0.2683265726 - - -
17 Hb_111844_010 0.2691976676 - - PREDICTED: uncharacterized protein LOC105632109 [Jatropha curcas]
18 Hb_001195_300 0.2706228691 - - PREDICTED: DUF21 domain-containing protein At1g47330 isoform X1 [Jatropha curcas]
19 Hb_010488_040 0.2732839554 - - PREDICTED: phosphomannomutase [Populus euphratica]
20 Hb_114336_030 0.2739437782 - - PREDICTED: uncharacterized protein LOC105642104 [Jatropha curcas]

Gene co-expression network

sample Hb_004846_100 Hb_004846_100 Hb_155541_010 Hb_155541_010 Hb_004846_100--Hb_155541_010 Hb_001862_120 Hb_001862_120 Hb_004846_100--Hb_001862_120 Hb_000743_030 Hb_000743_030 Hb_004846_100--Hb_000743_030 Hb_010913_010 Hb_010913_010 Hb_004846_100--Hb_010913_010 Hb_000275_020 Hb_000275_020 Hb_004846_100--Hb_000275_020 Hb_001005_160 Hb_001005_160 Hb_004846_100--Hb_001005_160 Hb_011485_090 Hb_011485_090 Hb_155541_010--Hb_011485_090 Hb_118228_010 Hb_118228_010 Hb_155541_010--Hb_118228_010 Hb_005928_050 Hb_005928_050 Hb_155541_010--Hb_005928_050 Hb_000302_130 Hb_000302_130 Hb_155541_010--Hb_000302_130 Hb_155541_010--Hb_010913_010 Hb_006907_100 Hb_006907_100 Hb_155541_010--Hb_006907_100 Hb_001386_110 Hb_001386_110 Hb_001862_120--Hb_001386_110 Hb_000676_140 Hb_000676_140 Hb_001862_120--Hb_000676_140 Hb_001221_560 Hb_001221_560 Hb_001862_120--Hb_001221_560 Hb_000627_260 Hb_000627_260 Hb_001862_120--Hb_000627_260 Hb_001623_100 Hb_001623_100 Hb_001862_120--Hb_001623_100 Hb_018279_020 Hb_018279_020 Hb_001862_120--Hb_018279_020 Hb_001911_040 Hb_001911_040 Hb_000743_030--Hb_001911_040 Hb_006570_150 Hb_006570_150 Hb_000743_030--Hb_006570_150 Hb_001221_220 Hb_001221_220 Hb_000743_030--Hb_001221_220 Hb_000538_240 Hb_000538_240 Hb_000743_030--Hb_000538_240 Hb_002631_280 Hb_002631_280 Hb_000743_030--Hb_002631_280 Hb_000422_030 Hb_000422_030 Hb_000743_030--Hb_000422_030 Hb_010913_010--Hb_006907_100 Hb_000099_230 Hb_000099_230 Hb_010913_010--Hb_000099_230 Hb_010913_010--Hb_011485_090 Hb_010913_010--Hb_118228_010 Hb_060715_010 Hb_060715_010 Hb_000275_020--Hb_060715_010 Hb_006788_120 Hb_006788_120 Hb_000275_020--Hb_006788_120 Hb_012120_030 Hb_012120_030 Hb_000275_020--Hb_012120_030 Hb_023732_060 Hb_023732_060 Hb_000275_020--Hb_023732_060 Hb_000010_210 Hb_000010_210 Hb_000275_020--Hb_000010_210 Hb_000224_200 Hb_000224_200 Hb_000275_020--Hb_000224_200 Hb_007894_210 Hb_007894_210 Hb_001005_160--Hb_007894_210 Hb_010488_040 Hb_010488_040 Hb_001005_160--Hb_010488_040 Hb_000438_090 Hb_000438_090 Hb_001005_160--Hb_000438_090 Hb_000926_230 Hb_000926_230 Hb_001005_160--Hb_000926_230 Hb_001545_050 Hb_001545_050 Hb_001005_160--Hb_001545_050 Hb_002411_080 Hb_002411_080 Hb_001005_160--Hb_002411_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0248016 0.0783115 0.172634 0.225505 0.174038 0.0468622
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.278106 0.191484 0 0.0162923 0.0290828

CAGE analysis