Hb_004846_110

Information

Type -
Description -
Location Contig4846: 155188-156072
Sequence    

Annotation

kegg
ID pop:POPTR_0011s02720g
description POPTRDRAFT_568452; hypothetical protein
nr
ID KDP37948.1
description hypothetical protein JCGZ_04591 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KSG3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04591 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004846_110 0.0 - - hypothetical protein JCGZ_04591 [Jatropha curcas]
2 Hb_000037_150 0.0595173453 - - PREDICTED: disease resistance response protein 206-like [Jatropha curcas]
3 Hb_000964_080 0.0607320506 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Jatropha curcas]
4 Hb_011912_010 0.0611834099 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
5 Hb_001307_180 0.0626883468 - - PREDICTED: cellulose synthase A catalytic subunit 4 [UDP-forming] isoform X1 [Jatropha curcas]
6 Hb_002660_180 0.0634636967 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000413_030 0.073099321 - - PREDICTED: NAD(P)H dehydrogenase (quinone) FQR1-like [Jatropha curcas]
8 Hb_000422_090 0.0741068747 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003376_060 0.0744148621 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9 isoform X1 [Jatropha curcas]
10 Hb_070771_010 0.0784772228 - - PREDICTED: uncharacterized membrane protein At1g06890 [Jatropha curcas]
11 Hb_001051_060 0.081146617 - - UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter, putative [Ricinus communis]
12 Hb_005616_020 0.0813896457 - - kinase, putative [Ricinus communis]
13 Hb_033149_010 0.0816473464 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
14 Hb_010288_010 0.0825140725 - - Beta-glucosidase, putative [Ricinus communis]
15 Hb_000696_130 0.0835004824 - - nucleic acid binding protein, putative [Ricinus communis]
16 Hb_001158_170 0.0853763727 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001477_050 0.0863456124 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
18 Hb_000836_640 0.0868921114 - - PREDICTED: uncharacterized protein LOC105644242 [Jatropha curcas]
19 Hb_000007_190 0.08719502 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 10-like [Jatropha curcas]
20 Hb_002636_170 0.0872217998 - - DNA-3-methyladenine glycosylase, putative [Ricinus communis]

Gene co-expression network

sample Hb_004846_110 Hb_004846_110 Hb_000037_150 Hb_000037_150 Hb_004846_110--Hb_000037_150 Hb_000964_080 Hb_000964_080 Hb_004846_110--Hb_000964_080 Hb_011912_010 Hb_011912_010 Hb_004846_110--Hb_011912_010 Hb_001307_180 Hb_001307_180 Hb_004846_110--Hb_001307_180 Hb_002660_180 Hb_002660_180 Hb_004846_110--Hb_002660_180 Hb_000413_030 Hb_000413_030 Hb_004846_110--Hb_000413_030 Hb_000037_150--Hb_011912_010 Hb_000037_150--Hb_002660_180 Hb_024074_030 Hb_024074_030 Hb_000037_150--Hb_024074_030 Hb_001477_050 Hb_001477_050 Hb_000037_150--Hb_001477_050 Hb_000696_130 Hb_000696_130 Hb_000037_150--Hb_000696_130 Hb_000964_080--Hb_000413_030 Hb_003376_060 Hb_003376_060 Hb_000964_080--Hb_003376_060 Hb_000964_080--Hb_011912_010 Hb_000964_080--Hb_000037_150 Hb_001158_170 Hb_001158_170 Hb_000964_080--Hb_001158_170 Hb_011912_010--Hb_001307_180 Hb_011912_010--Hb_000413_030 Hb_070771_010 Hb_070771_010 Hb_011912_010--Hb_070771_010 Hb_003645_040 Hb_003645_040 Hb_011912_010--Hb_003645_040 Hb_064047_020 Hb_064047_020 Hb_011912_010--Hb_064047_020 Hb_001307_180--Hb_003645_040 Hb_012633_020 Hb_012633_020 Hb_001307_180--Hb_012633_020 Hb_001307_180--Hb_070771_010 Hb_001307_180--Hb_002660_180 Hb_000836_640 Hb_000836_640 Hb_001307_180--Hb_000836_640 Hb_002660_180--Hb_000696_130 Hb_002636_170 Hb_002636_170 Hb_002660_180--Hb_002636_170 Hb_002660_180--Hb_024074_030 Hb_000422_090 Hb_000422_090 Hb_002660_180--Hb_000422_090 Hb_000413_030--Hb_064047_020 Hb_000413_030--Hb_003376_060 Hb_000413_030--Hb_000037_150 Hb_000413_030--Hb_001307_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.284859 0.812695 15.3802 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 6.63235

CAGE analysis