Hb_004846_170

Information

Type -
Description -
Location Contig4846: 229050-231017
Sequence    

Annotation

kegg
ID rcu:RCOM_1442280
description heat shock protein, putative (EC:1.3.1.74)
nr
ID ACC93947.1
description heat-shock protein 70 [Hevea brasiliensis]
swissprot
ID P26413
description Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1
trembl
ID B2MW33
description Heat-shock protein 70 OS=Hevea brasiliensis GN=HSP70 PE=2 SV=1
Gene Ontology
ID GO:0005524
description heat shock 70 kda protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004846_170 0.0 - - heat-shock protein 70 [Hevea brasiliensis]
2 Hb_000684_340 0.1318915708 - - PREDICTED: L-ascorbate peroxidase 2, cytosolic [Pyrus x bretschneideri]
3 Hb_001269_560 0.1505463253 - - heat-shock protein 70 [Hevea brasiliensis]
4 Hb_125948_020 0.1934274727 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
5 Hb_079297_010 0.224998067 - - hypothetical protein VITISV_012409 [Vitis vinifera]
6 Hb_003637_030 0.2271238031 - - -
7 Hb_086484_010 0.227637609 - - PREDICTED: uncharacterized protein LOC101259761 [Solanum lycopersicum]
8 Hb_102355_010 0.2279567796 - - PREDICTED: uncharacterized protein LOC104094591, partial [Nicotiana tomentosiformis]
9 Hb_002708_010 0.2306262685 - - -
10 Hb_185830_100 0.2309156327 - - -
11 Hb_001863_210 0.2311862203 - - -
12 Hb_006387_010 0.2328850907 - - PREDICTED: uncharacterized protein LOC105649124 [Jatropha curcas]
13 Hb_049827_010 0.2336876948 - - PREDICTED: uncharacterized protein LOC105762110 [Gossypium raimondii]
14 Hb_003392_010 0.2344100933 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
15 Hb_012264_040 0.2437804734 - - -
16 Hb_135941_010 0.2481577607 - - hypothetical protein JCGZ_13805 [Jatropha curcas]
17 Hb_133862_010 0.2494913066 - - hypothetical protein POPTR_0009s13360g [Populus trichocarpa]
18 Hb_001066_020 0.2562372158 - - PREDICTED: uncharacterized protein LOC104908874, partial [Beta vulgaris subsp. vulgaris]
19 Hb_000140_370 0.2564484738 - - PREDICTED: BAG family molecular chaperone regulator 6 [Jatropha curcas]
20 Hb_000488_030 0.2619671261 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]

Gene co-expression network

sample Hb_004846_170 Hb_004846_170 Hb_000684_340 Hb_000684_340 Hb_004846_170--Hb_000684_340 Hb_001269_560 Hb_001269_560 Hb_004846_170--Hb_001269_560 Hb_125948_020 Hb_125948_020 Hb_004846_170--Hb_125948_020 Hb_079297_010 Hb_079297_010 Hb_004846_170--Hb_079297_010 Hb_003637_030 Hb_003637_030 Hb_004846_170--Hb_003637_030 Hb_086484_010 Hb_086484_010 Hb_004846_170--Hb_086484_010 Hb_008064_010 Hb_008064_010 Hb_000684_340--Hb_008064_010 Hb_000684_340--Hb_001269_560 Hb_033623_010 Hb_033623_010 Hb_000684_340--Hb_033623_010 Hb_002928_070 Hb_002928_070 Hb_000684_340--Hb_002928_070 Hb_144951_010 Hb_144951_010 Hb_000684_340--Hb_144951_010 Hb_000140_370 Hb_000140_370 Hb_001269_560--Hb_000140_370 Hb_001269_560--Hb_125948_020 Hb_004846_180 Hb_004846_180 Hb_001269_560--Hb_004846_180 Hb_003647_120 Hb_003647_120 Hb_001269_560--Hb_003647_120 Hb_023528_010 Hb_023528_010 Hb_125948_020--Hb_023528_010 Hb_007943_010 Hb_007943_010 Hb_125948_020--Hb_007943_010 Hb_004529_020 Hb_004529_020 Hb_125948_020--Hb_004529_020 Hb_003392_010 Hb_003392_010 Hb_125948_020--Hb_003392_010 Hb_049827_010 Hb_049827_010 Hb_125948_020--Hb_049827_010 Hb_000488_030 Hb_000488_030 Hb_079297_010--Hb_000488_030 Hb_079297_010--Hb_125948_020 Hb_000046_220 Hb_000046_220 Hb_079297_010--Hb_000046_220 Hb_079297_010--Hb_001269_560 Hb_079297_010--Hb_049827_010 Hb_003637_030--Hb_086484_010 Hb_102355_010 Hb_102355_010 Hb_003637_030--Hb_102355_010 Hb_002708_010 Hb_002708_010 Hb_003637_030--Hb_002708_010 Hb_185830_100 Hb_185830_100 Hb_003637_030--Hb_185830_100 Hb_001863_210 Hb_001863_210 Hb_003637_030--Hb_001863_210 Hb_006387_010 Hb_006387_010 Hb_003637_030--Hb_006387_010 Hb_086484_010--Hb_102355_010 Hb_086484_010--Hb_002708_010 Hb_086484_010--Hb_185830_100 Hb_086484_010--Hb_001863_210 Hb_086484_010--Hb_006387_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.8584 257.847 1.56385 7.67534 235.096 21.5196
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.29869 0.668893 2.39868 1.76239 5.65175

CAGE analysis