Hb_004846_180

Information

Type -
Description -
Location Contig4846: 232612-234579
Sequence    

Annotation

kegg
ID rcu:RCOM_1442270
description heat shock protein, putative (EC:1.3.1.74)
nr
ID XP_002512741.1
description heat shock protein, putative [Ricinus communis]
swissprot
ID Q9S9N1
description Heat shock 70 kDa protein 5 OS=Arabidopsis thaliana GN=HSP70-5 PE=2 SV=1
trembl
ID B9RGN2
description Heat shock protein, putative OS=Ricinus communis GN=RCOM_1442270 PE=3 SV=1
Gene Ontology
ID GO:0005524
description heat shock 70 kda protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44925: 232507-234778
cDNA
(Sanger)
(ID:Location)		 045_I23.ab1: 232507-233255

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004846_180 0.0 - - heat shock protein, putative [Ricinus communis]
2 Hb_025194_030 0.1291430397 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
3 Hb_182807_020 0.140565845 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
4 Hb_184326_010 0.1461932869 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
5 Hb_008749_050 0.1717982165 - - PREDICTED: uncharacterized J domain-containing protein C4H3.01 [Jatropha curcas]
6 Hb_000853_300 0.1737314737 - - -
7 Hb_007382_020 0.173839426 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
8 Hb_003647_120 0.1873095839 - - 18.2 kDa class I heat shock family protein [Populus trichocarpa]
9 Hb_003992_260 0.1935550319 - - PREDICTED: 26.5 kDa heat shock protein, mitochondrial [Jatropha curcas]
10 Hb_000205_070 0.2067804643 - - kinase, putative [Ricinus communis]
11 Hb_000853_290 0.2082082462 - - PREDICTED: uncharacterized protein LOC105642585 [Jatropha curcas]
12 Hb_000140_370 0.2087549301 - - PREDICTED: BAG family molecular chaperone regulator 6 [Jatropha curcas]
13 Hb_000206_130 0.2092709809 - - unnamed protein product [Vitis vinifera]
14 Hb_006745_020 0.2096942046 - - PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas]
15 Hb_012340_020 0.2105216709 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial [Jatropha curcas]
16 Hb_001723_110 0.2110245064 - - PREDICTED: solute carrier family 25 member 44-like isoform X2 [Malus domestica]
17 Hb_000739_290 0.2126848871 - - cytochrome P450, putative [Ricinus communis]
18 Hb_029388_040 0.215472931 - - PREDICTED: GEM-like protein 5 [Jatropha curcas]
19 Hb_003337_070 0.2227922458 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
20 Hb_004097_020 0.2315705971 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_004846_180 Hb_004846_180 Hb_025194_030 Hb_025194_030 Hb_004846_180--Hb_025194_030 Hb_182807_020 Hb_182807_020 Hb_004846_180--Hb_182807_020 Hb_184326_010 Hb_184326_010 Hb_004846_180--Hb_184326_010 Hb_008749_050 Hb_008749_050 Hb_004846_180--Hb_008749_050 Hb_000853_300 Hb_000853_300 Hb_004846_180--Hb_000853_300 Hb_007382_020 Hb_007382_020 Hb_004846_180--Hb_007382_020 Hb_025194_030--Hb_007382_020 Hb_025194_030--Hb_008749_050 Hb_025194_030--Hb_184326_010 Hb_000140_370 Hb_000140_370 Hb_025194_030--Hb_000140_370 Hb_000853_290 Hb_000853_290 Hb_025194_030--Hb_000853_290 Hb_182807_020--Hb_184326_010 Hb_000206_130 Hb_000206_130 Hb_182807_020--Hb_000206_130 Hb_000205_070 Hb_000205_070 Hb_182807_020--Hb_000205_070 Hb_006745_020 Hb_006745_020 Hb_182807_020--Hb_006745_020 Hb_182807_020--Hb_000853_290 Hb_003647_120 Hb_003647_120 Hb_184326_010--Hb_003647_120 Hb_184326_010--Hb_006745_020 Hb_003337_070 Hb_003337_070 Hb_184326_010--Hb_003337_070 Hb_000008_230 Hb_000008_230 Hb_008749_050--Hb_000008_230 Hb_008749_050--Hb_000140_370 Hb_012340_020 Hb_012340_020 Hb_008749_050--Hb_012340_020 Hb_002918_310 Hb_002918_310 Hb_008749_050--Hb_002918_310 Hb_000853_300--Hb_000853_290 Hb_000853_300--Hb_182807_020 Hb_000853_300--Hb_025194_030 Hb_001951_120 Hb_001951_120 Hb_000853_300--Hb_001951_120 Hb_004097_020 Hb_004097_020 Hb_000853_300--Hb_004097_020 Hb_007382_020--Hb_008749_050 Hb_007382_020--Hb_184326_010 Hb_168978_040 Hb_168978_040 Hb_007382_020--Hb_168978_040 Hb_003992_260 Hb_003992_260 Hb_007382_020--Hb_003992_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
492.249 933.854 2.64251 19.7218 2781.88 688.697
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
136.363 56.7475 168.079 34.55 19.0556

CAGE analysis