Hb_004846_200

Information

Type -
Description -
Location Contig4846: 239059-243189
Sequence    

Annotation

kegg
ID rcu:RCOM_1442250
description Anthranilate N-benzoyltransferase protein, putative (EC:2.3.1.144)
nr
ID XP_012067474.1
description PREDICTED: shikimate O-hydroxycinnamoyltransferase [Jatropha curcas]
swissprot
ID Q9FI78
description Shikimate O-hydroxycinnamoyltransferase OS=Arabidopsis thaliana GN=HST PE=2 SV=1
trembl
ID A0A067L3Y5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26971 PE=4 SV=1
Gene Ontology
ID GO:0016747
description anthranilate n-benzoyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44927: 239071-243166 , PASA_asmbl_44928: 240616-240803 , PASA_asmbl_44929: 241682-241881
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004846_200 0.0 - - PREDICTED: shikimate O-hydroxycinnamoyltransferase [Jatropha curcas]
2 Hb_000025_090 0.1393358987 - - tubulin beta chain, putative [Ricinus communis]
3 Hb_033153_020 0.1538438798 transcription factor TF Family: ARF Auxin response factor, putative [Ricinus communis]
4 Hb_006487_050 0.1663485412 - - hypothetical protein PHAVU_005G049600g [Phaseolus vulgaris]
5 Hb_000554_010 0.1673990671 - - transporter, putative [Ricinus communis]
6 Hb_012395_180 0.1709272006 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
7 Hb_001002_040 0.1727760019 - - PREDICTED: ATP-citrate synthase beta chain protein 2 [Gossypium raimondii]
8 Hb_000281_110 0.1735050148 - - PREDICTED: pumilio homolog 12 [Jatropha curcas]
9 Hb_002374_020 0.174938792 - - PREDICTED: protein KRTCAP2 homolog [Jatropha curcas]
10 Hb_003994_270 0.1773063197 - - PREDICTED: uncharacterized protein LOC105646152 [Jatropha curcas]
11 Hb_008120_010 0.1775326625 - - PREDICTED: polyadenylate-binding protein-interacting protein 9-like [Populus euphratica]
12 Hb_000825_030 0.1793750087 - - zinc binding dehydrogenase, putative [Ricinus communis]
13 Hb_000521_160 0.1797899634 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000365_310 0.1801218325 - - auxin:hydrogen symporter, putative [Ricinus communis]
15 Hb_001633_020 0.1802202389 - - F22C12.10, putative isoform 2 [Theobroma cacao]
16 Hb_004375_130 0.1823986856 - - kinesin heavy chain, putative [Ricinus communis]
17 Hb_000529_160 0.1827428437 - - PREDICTED: uncharacterized protein At1g04910 [Populus euphratica]
18 Hb_000107_200 0.1829257562 - - hypothetical protein B456_005G214800 [Gossypium raimondii]
19 Hb_000086_200 0.183570731 - - ABC transporter family protein [Hevea brasiliensis]
20 Hb_001998_230 0.1845312239 - - PREDICTED: coatomer subunit epsilon-1 [Jatropha curcas]

Gene co-expression network

sample Hb_004846_200 Hb_004846_200 Hb_000025_090 Hb_000025_090 Hb_004846_200--Hb_000025_090 Hb_033153_020 Hb_033153_020 Hb_004846_200--Hb_033153_020 Hb_006487_050 Hb_006487_050 Hb_004846_200--Hb_006487_050 Hb_000554_010 Hb_000554_010 Hb_004846_200--Hb_000554_010 Hb_012395_180 Hb_012395_180 Hb_004846_200--Hb_012395_180 Hb_001002_040 Hb_001002_040 Hb_004846_200--Hb_001002_040 Hb_000933_060 Hb_000933_060 Hb_000025_090--Hb_000933_060 Hb_000083_250 Hb_000083_250 Hb_000025_090--Hb_000083_250 Hb_000107_200 Hb_000107_200 Hb_000025_090--Hb_000107_200 Hb_001018_130 Hb_001018_130 Hb_000025_090--Hb_001018_130 Hb_000077_090 Hb_000077_090 Hb_000025_090--Hb_000077_090 Hb_000086_200 Hb_000086_200 Hb_000025_090--Hb_000086_200 Hb_033153_020--Hb_012395_180 Hb_007741_020 Hb_007741_020 Hb_033153_020--Hb_007741_020 Hb_187739_020 Hb_187739_020 Hb_033153_020--Hb_187739_020 Hb_033153_020--Hb_000025_090 Hb_106724_020 Hb_106724_020 Hb_033153_020--Hb_106724_020 Hb_000069_160 Hb_000069_160 Hb_033153_020--Hb_000069_160 Hb_000364_010 Hb_000364_010 Hb_006487_050--Hb_000364_010 Hb_006487_050--Hb_000069_160 Hb_137403_010 Hb_137403_010 Hb_006487_050--Hb_137403_010 Hb_000620_080 Hb_000620_080 Hb_006487_050--Hb_000620_080 Hb_000606_080 Hb_000606_080 Hb_006487_050--Hb_000606_080 Hb_002217_310 Hb_002217_310 Hb_006487_050--Hb_002217_310 Hb_004007_160 Hb_004007_160 Hb_000554_010--Hb_004007_160 Hb_004705_040 Hb_004705_040 Hb_000554_010--Hb_004705_040 Hb_004375_130 Hb_004375_130 Hb_000554_010--Hb_004375_130 Hb_000281_110 Hb_000281_110 Hb_000554_010--Hb_000281_110 Hb_007479_050 Hb_007479_050 Hb_000554_010--Hb_007479_050 Hb_000649_050 Hb_000649_050 Hb_000554_010--Hb_000649_050 Hb_002671_100 Hb_002671_100 Hb_012395_180--Hb_002671_100 Hb_004934_070 Hb_004934_070 Hb_012395_180--Hb_004934_070 Hb_007403_060 Hb_007403_060 Hb_012395_180--Hb_007403_060 Hb_000785_080 Hb_000785_080 Hb_012395_180--Hb_000785_080 Hb_012395_180--Hb_000083_250 Hb_000529_160 Hb_000529_160 Hb_001002_040--Hb_000529_160 Hb_005271_170 Hb_005271_170 Hb_001002_040--Hb_005271_170 Hb_002301_280 Hb_002301_280 Hb_001002_040--Hb_002301_280 Hb_000365_310 Hb_000365_310 Hb_001002_040--Hb_000365_310 Hb_000179_170 Hb_000179_170 Hb_001002_040--Hb_000179_170 Hb_009558_020 Hb_009558_020 Hb_001002_040--Hb_009558_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
114.858 11.2068 10.5566 168.43 77.0132 136.575
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
123.662 45.8881 45.9517 35.0681 49.5787

CAGE analysis