Hb_004880_150

Information

Type -
Description -
Location Contig4880: 178262-182204
Sequence    

Annotation

kegg
ID pop:POPTR_0011s12800g
description POPTRDRAFT_1094406; hypothetical protein
nr
ID XP_012070680.1
description PREDICTED: uncharacterized protein LOC105632834 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KS57
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00724 PE=4 SV=1
Gene Ontology
ID GO:0006950
description adenine nucleotide alpha hydrolases-like superfamily protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45100: 178277-182201
cDNA
(Sanger)
(ID:Location)		 025_C04.ab1: 181458-182201

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004880_150 0.0 - - PREDICTED: uncharacterized protein LOC105632834 [Jatropha curcas]
2 Hb_001221_020 0.0585345218 - - PREDICTED: probable aspartyl aminopeptidase [Jatropha curcas]
3 Hb_003776_060 0.058668463 - - PREDICTED: uncharacterized protein LOC105641220 [Jatropha curcas]
4 Hb_002477_290 0.0650918639 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial-like [Jatropha curcas]
5 Hb_002811_100 0.0704516919 - - PREDICTED: uncharacterized protein LOC105647658 [Jatropha curcas]
6 Hb_000025_190 0.073872905 - - 26S proteasome non-atpase regulatory subunit, putative [Ricinus communis]
7 Hb_005648_010 0.0759469014 - - PREDICTED: malate dehydrogenase, glyoxysomal isoform X1 [Jatropha curcas]
8 Hb_002357_060 0.0788358668 - - hypothetical protein CICLE_v10006112mg [Citrus clementina]
9 Hb_000841_050 0.0791969013 - - hypothetical protein L484_019972 [Morus notabilis]
10 Hb_023001_040 0.0820240529 - - Metallopeptidase M24 family protein isoform 1 [Theobroma cacao]
11 Hb_002660_170 0.0824534216 - - PREDICTED: dystrophia myotonica WD repeat-containing protein isoform X2 [Jatropha curcas]
12 Hb_016347_010 0.082813377 - - protein transporter, putative [Ricinus communis]
13 Hb_042474_010 0.0831820835 - - PREDICTED: adenylyltransferase and sulfurtransferase MOCS3 [Jatropha curcas]
14 Hb_001104_230 0.0892727529 - - PREDICTED: fructose-bisphosphate aldolase cytoplasmic isozyme [Jatropha curcas]
15 Hb_000363_190 0.0906205904 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-2-like isoform X1 [Jatropha curcas]
16 Hb_001828_180 0.090741075 - - 26S proteasome regulatory subunit S3, putative [Ricinus communis]
17 Hb_000367_090 0.0910899624 - - PREDICTED: plant intracellular Ras-group-related LRR protein 7 [Jatropha curcas]
18 Hb_062537_010 0.0920775179 - - hypothetical protein JCGZ_13884 [Jatropha curcas]
19 Hb_000327_250 0.0926168049 - - PREDICTED: macrophage erythroblast attacher [Jatropha curcas]
20 Hb_000190_090 0.0939578706 - - PREDICTED: uncharacterized protein LOC105649930 [Jatropha curcas]

Gene co-expression network

sample Hb_004880_150 Hb_004880_150 Hb_001221_020 Hb_001221_020 Hb_004880_150--Hb_001221_020 Hb_003776_060 Hb_003776_060 Hb_004880_150--Hb_003776_060 Hb_002477_290 Hb_002477_290 Hb_004880_150--Hb_002477_290 Hb_002811_100 Hb_002811_100 Hb_004880_150--Hb_002811_100 Hb_000025_190 Hb_000025_190 Hb_004880_150--Hb_000025_190 Hb_005648_010 Hb_005648_010 Hb_004880_150--Hb_005648_010 Hb_000841_050 Hb_000841_050 Hb_001221_020--Hb_000841_050 Hb_001221_020--Hb_000025_190 Hb_001221_020--Hb_005648_010 Hb_001221_020--Hb_003776_060 Hb_001493_150 Hb_001493_150 Hb_001221_020--Hb_001493_150 Hb_003776_060--Hb_002811_100 Hb_000327_250 Hb_000327_250 Hb_003776_060--Hb_000327_250 Hb_003544_030 Hb_003544_030 Hb_003776_060--Hb_003544_030 Hb_023001_040 Hb_023001_040 Hb_003776_060--Hb_023001_040 Hb_002477_290--Hb_000841_050 Hb_002660_170 Hb_002660_170 Hb_002477_290--Hb_002660_170 Hb_007218_120 Hb_007218_120 Hb_002477_290--Hb_007218_120 Hb_000251_030 Hb_000251_030 Hb_002477_290--Hb_000251_030 Hb_006059_010 Hb_006059_010 Hb_002477_290--Hb_006059_010 Hb_002811_100--Hb_023001_040 Hb_010775_040 Hb_010775_040 Hb_002811_100--Hb_010775_040 Hb_000363_190 Hb_000363_190 Hb_002811_100--Hb_000363_190 Hb_002357_060 Hb_002357_060 Hb_002811_100--Hb_002357_060 Hb_062537_010 Hb_062537_010 Hb_000025_190--Hb_062537_010 Hb_000025_190--Hb_002660_170 Hb_000025_190--Hb_005648_010 Hb_003988_050 Hb_003988_050 Hb_000025_190--Hb_003988_050 Hb_000115_150 Hb_000115_150 Hb_000025_190--Hb_000115_150 Hb_002093_060 Hb_002093_060 Hb_005648_010--Hb_002093_060 Hb_005648_010--Hb_002357_060 Hb_005648_010--Hb_000115_150 Hb_000120_370 Hb_000120_370 Hb_005648_010--Hb_000120_370
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.99573 10.8741 11.9379 24.1288 7.07226 9.07027
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.69404 18.0245 13.0395 27.6745 16.1982

CAGE analysis