Hb_004884_020

Information

Type -
Description -
Location Contig4884: 20721-24507
Sequence    

Annotation

kegg
ID cmo:103502194
description BAG family molecular chaperone regulator 4
nr
ID XP_012089804.1
description PREDICTED: BAG family molecular chaperone regulator 4 isoform X2 [Jatropha curcas]
swissprot
ID Q8RX71
description BAG family molecular chaperone regulator 4 OS=Arabidopsis thaliana GN=BAG4 PE=1 SV=1
trembl
ID A0A067JS74
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00442 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45133: 21014-22403 , PASA_asmbl_45135: 22432-22745 , PASA_asmbl_45136: 22974-23457 , PASA_asmbl_45137: 23477-23959
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004884_020 0.0 - - PREDICTED: BAG family molecular chaperone regulator 4 isoform X2 [Jatropha curcas]
2 Hb_001009_100 0.1277105494 - - -
3 Hb_003388_030 0.1352523669 - - PREDICTED: uncharacterized protein LOC105649746 isoform X1 [Jatropha curcas]
4 Hb_003058_020 0.1359803138 - - PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Jatropha curcas]
5 Hb_004987_070 0.1359837274 - - PREDICTED: heat shock 70 kDa protein 17-like isoform X1 [Jatropha curcas]
6 Hb_000384_080 0.1386404086 - - PREDICTED: RING-H2 finger protein ATL7-like isoform X2 [Jatropha curcas]
7 Hb_001117_160 0.1508057869 - - PREDICTED: pentatricopeptide repeat-containing protein At1g10270 [Jatropha curcas]
8 Hb_004884_030 0.1521273973 - - PREDICTED: ammonium transporter 3 member 3 [Vitis vinifera]
9 Hb_000069_320 0.1585386178 - - PREDICTED: uncharacterized protein LOC105642846 [Jatropha curcas]
10 Hb_002368_070 0.1613099065 - - PREDICTED: uncharacterized protein LOC105634087 [Jatropha curcas]
11 Hb_003900_030 0.1666650597 - - PREDICTED: pentatricopeptide repeat-containing protein At2g41720 isoform X1 [Jatropha curcas]
12 Hb_007456_040 0.1684428226 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [Jatropha curcas]
13 Hb_002631_140 0.1728219656 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 12, chloroplastic [Jatropha curcas]
14 Hb_031658_040 0.1732608186 - - -
15 Hb_012490_060 0.1735788578 - - PREDICTED: UBP1-associated proteins 1C isoform X1 [Jatropha curcas]
16 Hb_048141_030 0.1744079077 - - PREDICTED: pentatricopeptide repeat-containing protein At3g59040-like [Prunus mume]
17 Hb_005527_030 0.1760879698 - - PREDICTED: pentatricopeptide repeat-containing protein At3g42630 isoform X1 [Jatropha curcas]
18 Hb_003739_030 0.1768620648 - - PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [Jatropha curcas]
19 Hb_000859_050 0.1774116204 - - hypothetical protein JCGZ_17054 [Jatropha curcas]
20 Hb_000170_060 0.1778126964 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105639010 [Jatropha curcas]

Gene co-expression network

sample Hb_004884_020 Hb_004884_020 Hb_001009_100 Hb_001009_100 Hb_004884_020--Hb_001009_100 Hb_003388_030 Hb_003388_030 Hb_004884_020--Hb_003388_030 Hb_003058_020 Hb_003058_020 Hb_004884_020--Hb_003058_020 Hb_004987_070 Hb_004987_070 Hb_004884_020--Hb_004987_070 Hb_000384_080 Hb_000384_080 Hb_004884_020--Hb_000384_080 Hb_001117_160 Hb_001117_160 Hb_004884_020--Hb_001117_160 Hb_001009_100--Hb_003388_030 Hb_001009_100--Hb_004987_070 Hb_000300_120 Hb_000300_120 Hb_001009_100--Hb_000300_120 Hb_000069_320 Hb_000069_320 Hb_001009_100--Hb_000069_320 Hb_067776_020 Hb_067776_020 Hb_001009_100--Hb_067776_020 Hb_003388_030--Hb_067776_020 Hb_003388_030--Hb_000384_080 Hb_003388_030--Hb_004987_070 Hb_003388_030--Hb_000300_120 Hb_005470_020 Hb_005470_020 Hb_003388_030--Hb_005470_020 Hb_003058_020--Hb_004987_070 Hb_000015_100 Hb_000015_100 Hb_003058_020--Hb_000015_100 Hb_048141_020 Hb_048141_020 Hb_003058_020--Hb_048141_020 Hb_011931_060 Hb_011931_060 Hb_003058_020--Hb_011931_060 Hb_006618_050 Hb_006618_050 Hb_003058_020--Hb_006618_050 Hb_007035_040 Hb_007035_040 Hb_003058_020--Hb_007035_040 Hb_004987_070--Hb_000015_100 Hb_004987_070--Hb_000384_080 Hb_004987_070--Hb_005470_020 Hb_000780_190 Hb_000780_190 Hb_004987_070--Hb_000780_190 Hb_004701_050 Hb_004701_050 Hb_000384_080--Hb_004701_050 Hb_001369_350 Hb_001369_350 Hb_000384_080--Hb_001369_350 Hb_001369_040 Hb_001369_040 Hb_000384_080--Hb_001369_040 Hb_001504_040 Hb_001504_040 Hb_000384_080--Hb_001504_040 Hb_002631_140 Hb_002631_140 Hb_000384_080--Hb_002631_140 Hb_001117_160--Hb_000069_320 Hb_003604_030 Hb_003604_030 Hb_001117_160--Hb_003604_030 Hb_002097_050 Hb_002097_050 Hb_001117_160--Hb_002097_050 Hb_001431_120 Hb_001431_120 Hb_001117_160--Hb_001431_120 Hb_001401_060 Hb_001401_060 Hb_001117_160--Hb_001401_060 Hb_001440_040 Hb_001440_040 Hb_001117_160--Hb_001440_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.601242 0.658957 0.593199 0.291336 1.21945 1.22887
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.088766 0.167637 0.0798874 0.682357 1.39549

CAGE analysis