Hb_004931_010

Information

Type -
Description -
Location Contig4931: 1269-1934
Sequence    

Annotation

kegg
ID rcu:RCOM_1022280
description inosine triphosphate pyrophosphatase, putative (EC:3.6.1.19)
nr
ID XP_002518147.1
description inosine triphosphate pyrophosphatase, putative [Ricinus communis]
swissprot
ID F6HS55
description Inosine triphosphate pyrophosphatase OS=Vitis vinifera GN=VIT_05s0051g00580 PE=2 SV=1
trembl
ID B9RWM8
description Inosine triphosphate pyrophosphatase OS=Ricinus communis GN=RCOM_1022280 PE=3 SV=1
Gene Ontology
ID GO:0005737
description inosine triphosphate pyrophosphatase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004931_010 0.0 - - inosine triphosphate pyrophosphatase, putative [Ricinus communis]
2 Hb_001186_080 0.2240954032 - - PREDICTED: F-box protein FBW2-like [Nelumbo nucifera]
3 Hb_001017_080 0.2259531963 - - hypothetical protein POPTR_0010s06020g [Populus trichocarpa]
4 Hb_003322_010 0.2285619799 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
5 Hb_000191_030 0.2304792919 - - hypothetical protein POPTR_0012s07830g [Populus trichocarpa]
6 Hb_153216_010 0.2338596282 - - PREDICTED: uncharacterized protein LOC105797726 [Gossypium raimondii]
7 Hb_001504_050 0.2346467234 - - hypothetical protein POPTR_0001s14840g [Populus trichocarpa]
8 Hb_000451_060 0.2508802929 - - hypothetical protein CICLE_v10010074mg [Citrus clementina]
9 Hb_148891_010 0.2572313134 - - -
10 Hb_126861_010 0.2589431589 - - hypothetical protein M569_05914, partial [Genlisea aurea]
11 Hb_005144_070 0.2625881194 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000152_100 0.2689012122 - - PREDICTED: probable protein phosphatase 2C 75 isoform X2 [Jatropha curcas]
13 Hb_001754_140 0.2718592696 - - PREDICTED: uncharacterized protein LOC105643419 [Jatropha curcas]
14 Hb_007885_010 0.2755754009 - - 60S ribosomal protein L24-1 isoform 1 [Theobroma cacao]
15 Hb_076693_040 0.2755878654 - - PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Tarenaya hassleriana]
16 Hb_148909_020 0.2776718995 - - PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Jatropha curcas]
17 Hb_002081_070 0.2782377036 - - PREDICTED: pyridoxal kinase [Jatropha curcas]
18 Hb_000445_190 0.280173623 - - -
19 Hb_137068_010 0.2803851668 - - hypothetical protein CISIN_1g003571mg [Citrus sinensis]
20 Hb_003185_110 0.2809582407 - - PREDICTED: cytochrome b-c1 complex subunit 7-2 [Nelumbo nucifera]

Gene co-expression network

sample Hb_004931_010 Hb_004931_010 Hb_001186_080 Hb_001186_080 Hb_004931_010--Hb_001186_080 Hb_001017_080 Hb_001017_080 Hb_004931_010--Hb_001017_080 Hb_003322_010 Hb_003322_010 Hb_004931_010--Hb_003322_010 Hb_000191_030 Hb_000191_030 Hb_004931_010--Hb_000191_030 Hb_153216_010 Hb_153216_010 Hb_004931_010--Hb_153216_010 Hb_001504_050 Hb_001504_050 Hb_004931_010--Hb_001504_050 Hb_000792_120 Hb_000792_120 Hb_001186_080--Hb_000792_120 Hb_168711_010 Hb_168711_010 Hb_001186_080--Hb_168711_010 Hb_000032_350 Hb_000032_350 Hb_001186_080--Hb_000032_350 Hb_000300_210 Hb_000300_210 Hb_001186_080--Hb_000300_210 Hb_001101_010 Hb_001101_010 Hb_001186_080--Hb_001101_010 Hb_000025_440 Hb_000025_440 Hb_001017_080--Hb_000025_440 Hb_156503_040 Hb_156503_040 Hb_001017_080--Hb_156503_040 Hb_109578_010 Hb_109578_010 Hb_001017_080--Hb_109578_010 Hb_000500_210 Hb_000500_210 Hb_001017_080--Hb_000500_210 Hb_000975_270 Hb_000975_270 Hb_001017_080--Hb_000975_270 Hb_001221_560 Hb_001221_560 Hb_003322_010--Hb_001221_560 Hb_003020_080 Hb_003020_080 Hb_003322_010--Hb_003020_080 Hb_000098_290 Hb_000098_290 Hb_003322_010--Hb_000098_290 Hb_000803_040 Hb_000803_040 Hb_003322_010--Hb_000803_040 Hb_001377_400 Hb_001377_400 Hb_003322_010--Hb_001377_400 Hb_000451_060 Hb_000451_060 Hb_000191_030--Hb_000451_060 Hb_004871_020 Hb_004871_020 Hb_000191_030--Hb_004871_020 Hb_153544_010 Hb_153544_010 Hb_000191_030--Hb_153544_010 Hb_019516_100 Hb_019516_100 Hb_000191_030--Hb_019516_100 Hb_000317_070 Hb_000317_070 Hb_000191_030--Hb_000317_070 Hb_000111_340 Hb_000111_340 Hb_000191_030--Hb_000111_340 Hb_092820_010 Hb_092820_010 Hb_153216_010--Hb_092820_010 Hb_006588_010 Hb_006588_010 Hb_153216_010--Hb_006588_010 Hb_004691_040 Hb_004691_040 Hb_153216_010--Hb_004691_040 Hb_153216_010--Hb_001017_080 Hb_035905_010 Hb_035905_010 Hb_153216_010--Hb_035905_010 Hb_000699_040 Hb_000699_040 Hb_001504_050--Hb_000699_040 Hb_004052_020 Hb_004052_020 Hb_001504_050--Hb_004052_020 Hb_003058_080 Hb_003058_080 Hb_001504_050--Hb_003058_080 Hb_001504_050--Hb_000451_060 Hb_001504_050--Hb_000191_030 Hb_000297_230 Hb_000297_230 Hb_001504_050--Hb_000297_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.42961 0.380826 3.17257 0.472613 1.09406 0.13328
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.55329 6.20689 0.241979 1.89145 0

CAGE analysis