Hb_004940_090

Information

Type -
Description -
Location Contig4940: 126979-135238
Sequence    

Annotation

kegg
ID fve:101299142
description LRR receptor-like serine/threonine-protein kinase EFR-like
nr
ID XP_012091060.1
description PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067LC70
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01308 PE=4 SV=1
Gene Ontology
ID GO:0016020
description receptor-like protein kinase at3g47110

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004940_090 0.0 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
2 Hb_001850_010 0.0877593299 - - PREDICTED: cytochrome P450 71B34-like [Jatropha curcas]
3 Hb_002025_370 0.1039121136 - - monooxygenase, putative [Ricinus communis]
4 Hb_039650_010 0.1058178532 - - cellulose synthase-like protein [Populus tomentosa]
5 Hb_006353_010 0.1084995678 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105634775 [Jatropha curcas]
6 Hb_000871_020 0.1101598008 - - receptor-kinase, putative [Ricinus communis]
7 Hb_000284_060 0.1128164713 desease resistance Gene Name: NB-ARC disease resistance protein (TIR-NBS-LRR class), putative [Medicago truncatula]
8 Hb_011924_030 0.1215931209 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_126024_010 0.1250906715 - - PREDICTED: probable aldo-keto reductase 1 [Populus euphratica]
10 Hb_005000_230 0.1309557011 transcription factor TF Family: bHLH PREDICTED: putative transcription factor bHLH041 [Jatropha curcas]
11 Hb_000233_060 0.1338439043 - - hypothetical protein JCGZ_14793 [Jatropha curcas]
12 Hb_067034_010 0.135526162 - - PREDICTED: vacuolar cation/proton exchanger 3-like [Jatropha curcas]
13 Hb_000164_180 0.140701872 - - (+)-delta-cadinene synthase isozyme A, putative [Ricinus communis]
14 Hb_000035_360 0.1412274242 - - PREDICTED: VQ motif-containing protein 31-like [Jatropha curcas]
15 Hb_009740_010 0.1420138382 - - receptor-kinase, putative [Ricinus communis]
16 Hb_064855_010 0.1424823719 - - ankyrin repeat-containing protein, putative [Ricinus communis]
17 Hb_023827_010 0.1472464222 - - Cucumber peeling cupredoxin, putative [Ricinus communis]
18 Hb_008707_020 0.1479066072 - - ATP binding protein, putative [Ricinus communis]
19 Hb_011639_130 0.1516695983 - - mads box protein, putative [Ricinus communis]
20 Hb_004829_050 0.1517654713 - - hypothetical protein TRIUR3_09654 [Triticum urartu]

Gene co-expression network

sample Hb_004940_090 Hb_004940_090 Hb_001850_010 Hb_001850_010 Hb_004940_090--Hb_001850_010 Hb_002025_370 Hb_002025_370 Hb_004940_090--Hb_002025_370 Hb_039650_010 Hb_039650_010 Hb_004940_090--Hb_039650_010 Hb_006353_010 Hb_006353_010 Hb_004940_090--Hb_006353_010 Hb_000871_020 Hb_000871_020 Hb_004940_090--Hb_000871_020 Hb_000284_060 Hb_000284_060 Hb_004940_090--Hb_000284_060 Hb_000119_050 Hb_000119_050 Hb_001850_010--Hb_000119_050 Hb_000522_020 Hb_000522_020 Hb_001850_010--Hb_000522_020 Hb_001850_010--Hb_039650_010 Hb_030873_010 Hb_030873_010 Hb_001850_010--Hb_030873_010 Hb_015473_020 Hb_015473_020 Hb_001850_010--Hb_015473_020 Hb_002025_370--Hb_039650_010 Hb_000111_130 Hb_000111_130 Hb_002025_370--Hb_000111_130 Hb_001365_040 Hb_001365_040 Hb_002025_370--Hb_001365_040 Hb_001274_040 Hb_001274_040 Hb_002025_370--Hb_001274_040 Hb_008707_020 Hb_008707_020 Hb_002025_370--Hb_008707_020 Hb_005000_230 Hb_005000_230 Hb_039650_010--Hb_005000_230 Hb_039650_010--Hb_008707_020 Hb_011924_030 Hb_011924_030 Hb_039650_010--Hb_011924_030 Hb_039650_010--Hb_000284_060 Hb_005081_060 Hb_005081_060 Hb_039650_010--Hb_005081_060 Hb_001271_040 Hb_001271_040 Hb_006353_010--Hb_001271_040 Hb_011924_010 Hb_011924_010 Hb_006353_010--Hb_011924_010 Hb_068447_010 Hb_068447_010 Hb_006353_010--Hb_068447_010 Hb_101778_020 Hb_101778_020 Hb_006353_010--Hb_101778_020 Hb_007676_070 Hb_007676_070 Hb_006353_010--Hb_007676_070 Hb_006586_020 Hb_006586_020 Hb_006353_010--Hb_006586_020 Hb_009740_010 Hb_009740_010 Hb_000871_020--Hb_009740_010 Hb_000871_020--Hb_011924_030 Hb_023827_010 Hb_023827_010 Hb_000871_020--Hb_023827_010 Hb_030593_010 Hb_030593_010 Hb_000871_020--Hb_030593_010 Hb_001766_090 Hb_001766_090 Hb_000871_020--Hb_001766_090 Hb_064855_010 Hb_064855_010 Hb_000871_020--Hb_064855_010 Hb_000284_060--Hb_011924_030 Hb_000035_360 Hb_000035_360 Hb_000284_060--Hb_000035_360 Hb_000284_060--Hb_008707_020 Hb_000284_060--Hb_000871_020 Hb_000233_060 Hb_000233_060 Hb_000284_060--Hb_000233_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.403597 0 0.00325336 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0503679 0.0181693

CAGE analysis