Hb_004951_060

Information

Type -
Description -
Location Contig4951: 60453-61351
Sequence    

Annotation

kegg
ID pop:POPTR_0013s09550g
description hypothetical protein
nr
ID XP_012072641.1
description PREDICTED: uncharacterized protein LOC105634399 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KNW2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06704 PE=4 SV=1
Gene Ontology
ID GO:0009507
description ethanolamine utilization eutq

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45437: 60452-61330
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004951_060 0.0 - - PREDICTED: uncharacterized protein LOC105634399 [Jatropha curcas]
2 Hb_062226_060 0.0684491109 - - PREDICTED: mitochondrial substrate carrier family protein B-like [Jatropha curcas]
3 Hb_000394_180 0.0685599512 - - PREDICTED: uncharacterized protein LOC105636995 [Jatropha curcas]
4 Hb_001662_130 0.0709683782 - - PREDICTED: bifunctional nuclease 2 isoform X1 [Jatropha curcas]
5 Hb_007192_030 0.0727241471 - - PREDICTED: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [Jatropha curcas]
6 Hb_000317_260 0.0728751488 - - unknown [Populus trichocarpa]
7 Hb_006846_150 0.0806581002 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001766_050 0.0884296625 - - PREDICTED: pentatricopeptide repeat-containing protein At3g29290 [Jatropha curcas]
9 Hb_005800_030 0.0902813608 - - PREDICTED: lysM and putative peptidoglycan-binding domain-containing protein 4-like [Jatropha curcas]
10 Hb_000811_070 0.090800416 - - PREDICTED: uncharacterized protein LOC105650695 [Jatropha curcas]
11 Hb_005167_010 0.0908571548 - - PREDICTED: serine/threonine-protein kinase At5g01020 isoform X1 [Jatropha curcas]
12 Hb_003266_030 0.0918418985 - - hypothetical protein POPTR_0002s05550g [Populus trichocarpa]
13 Hb_003411_090 0.0921802389 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase, putative [Ricinus communis]
14 Hb_007904_230 0.0931153661 - - PREDICTED: D-cysteine desulfhydrase 2, mitochondrial [Jatropha curcas]
15 Hb_007827_010 0.0948189851 - - PREDICTED: uncharacterized protein C12B10.15c [Jatropha curcas]
16 Hb_004452_120 0.0948741635 - - PREDICTED: uncharacterized protein LOC105639574 [Jatropha curcas]
17 Hb_133702_010 0.0953386749 - - PREDICTED: reticulon-4-interacting protein 1, mitochondrial isoform X1 [Jatropha curcas]
18 Hb_004257_010 0.0968246761 - - CMP-sialic acid transporter, putative [Ricinus communis]
19 Hb_000080_130 0.0973042029 - - PREDICTED: TBC1 domain family member 22B [Jatropha curcas]
20 Hb_001369_790 0.0975917532 - - PREDICTED: clp protease-related protein At4g12060, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_004951_060 Hb_004951_060 Hb_062226_060 Hb_062226_060 Hb_004951_060--Hb_062226_060 Hb_000394_180 Hb_000394_180 Hb_004951_060--Hb_000394_180 Hb_001662_130 Hb_001662_130 Hb_004951_060--Hb_001662_130 Hb_007192_030 Hb_007192_030 Hb_004951_060--Hb_007192_030 Hb_000317_260 Hb_000317_260 Hb_004951_060--Hb_000317_260 Hb_006846_150 Hb_006846_150 Hb_004951_060--Hb_006846_150 Hb_158530_020 Hb_158530_020 Hb_062226_060--Hb_158530_020 Hb_007904_230 Hb_007904_230 Hb_062226_060--Hb_007904_230 Hb_000364_050 Hb_000364_050 Hb_062226_060--Hb_000364_050 Hb_000023_360 Hb_000023_360 Hb_062226_060--Hb_000023_360 Hb_000811_070 Hb_000811_070 Hb_062226_060--Hb_000811_070 Hb_000394_180--Hb_007192_030 Hb_001369_790 Hb_001369_790 Hb_000394_180--Hb_001369_790 Hb_001301_340 Hb_001301_340 Hb_000394_180--Hb_001301_340 Hb_000394_180--Hb_006846_150 Hb_004257_010 Hb_004257_010 Hb_000394_180--Hb_004257_010 Hb_000080_130 Hb_000080_130 Hb_001662_130--Hb_000080_130 Hb_000590_120 Hb_000590_120 Hb_001662_130--Hb_000590_120 Hb_015675_040 Hb_015675_040 Hb_001662_130--Hb_015675_040 Hb_001766_050 Hb_001766_050 Hb_001662_130--Hb_001766_050 Hb_005653_070 Hb_005653_070 Hb_001662_130--Hb_005653_070 Hb_007192_030--Hb_001369_790 Hb_000086_080 Hb_000086_080 Hb_007192_030--Hb_000086_080 Hb_000622_290 Hb_000622_290 Hb_007192_030--Hb_000622_290 Hb_007192_030--Hb_007904_230 Hb_004440_060 Hb_004440_060 Hb_000317_260--Hb_004440_060 Hb_003411_090 Hb_003411_090 Hb_000317_260--Hb_003411_090 Hb_000317_260--Hb_007904_230 Hb_003266_030 Hb_003266_030 Hb_000317_260--Hb_003266_030 Hb_000317_260--Hb_001369_790 Hb_006846_150--Hb_000811_070 Hb_011689_120 Hb_011689_120 Hb_006846_150--Hb_011689_120 Hb_000403_070 Hb_000403_070 Hb_006846_150--Hb_000403_070 Hb_000487_260 Hb_000487_260 Hb_006846_150--Hb_000487_260 Hb_012799_170 Hb_012799_170 Hb_006846_150--Hb_012799_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
65.026 65.3534 154.705 176.43 49.6779 64.9168
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
163.399 171.647 96.94 88.6733 209.65

CAGE analysis