Hb_004970_100

Information

Type transcription factor
Description TF Family: HSF
Location Contig4970: 78350-79685
Sequence    

Annotation

kegg
ID rcu:RCOM_1590070
description DNA binding protein, putative
nr
ID XP_012068333.1
description PREDICTED: heat stress transcription factor B-4 [Jatropha curcas]
swissprot
ID Q9C635
description Heat stress transcription factor B-4 OS=Arabidopsis thaliana GN=HSFB4 PE=2 SV=1
trembl
ID A0A067LCE1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16126 PE=3 SV=1
Gene Ontology
ID GO:0005634
description heat stress transcription factor b-4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45550: 78442-79964
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004970_100 0.0 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-4 [Jatropha curcas]
2 Hb_006026_020 0.0856092234 - - PREDICTED: BTB/POZ domain-containing protein At5g48800 [Jatropha curcas]
3 Hb_003777_150 0.1006178887 - - PREDICTED: uncharacterized protein LOC105640938 isoform X1 [Jatropha curcas]
4 Hb_005214_050 0.1019947108 - - PREDICTED: leucine-rich repeat receptor protein kinase MSP1-like [Jatropha curcas]
5 Hb_000373_260 0.1058049534 - - hypothetical protein POPTR_0002s06820g [Populus trichocarpa]
6 Hb_001417_090 0.1066211177 - - PREDICTED: uncharacterized protein LOC105650625 [Jatropha curcas]
7 Hb_004031_050 0.1106046397 - - sinapyl alcohol dehydrogenase-like protein [Populus tremula x Populus tremuloides]
8 Hb_084304_010 0.1113276809 - - PREDICTED: probable auxin efflux carrier component 1c isoform X2 [Jatropha curcas]
9 Hb_120040_010 0.1124344529 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
10 Hb_020831_060 0.1132573792 - - PREDICTED: uncharacterized protein LOC105631088 [Jatropha curcas]
11 Hb_011355_020 0.1161399985 - - extensin, proline-rich protein, putative [Ricinus communis]
12 Hb_000740_080 0.1163169305 - - -
13 Hb_001675_290 0.1215386016 - - PREDICTED: transcription factor bHLH68-like isoform X1 [Jatropha curcas]
14 Hb_000011_260 0.1215733305 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000628_060 0.1218221952 - - PREDICTED: calmodulin-like protein 5 [Solanum lycopersicum]
16 Hb_000149_020 0.1241357456 - - Proline-rich receptor-like protein kinase PERK14 [Glycine soja]
17 Hb_036029_020 0.1251644036 - - PREDICTED: patellin-3-like [Jatropha curcas]
18 Hb_003427_070 0.1303412328 - - hypothetical protein POPTR_0067s00310g [Populus trichocarpa]
19 Hb_030360_010 0.1332620914 - - -
20 Hb_000813_020 0.1349928677 - - PREDICTED: metacaspase-3-like [Jatropha curcas]

Gene co-expression network

sample Hb_004970_100 Hb_004970_100 Hb_006026_020 Hb_006026_020 Hb_004970_100--Hb_006026_020 Hb_003777_150 Hb_003777_150 Hb_004970_100--Hb_003777_150 Hb_005214_050 Hb_005214_050 Hb_004970_100--Hb_005214_050 Hb_000373_260 Hb_000373_260 Hb_004970_100--Hb_000373_260 Hb_001417_090 Hb_001417_090 Hb_004970_100--Hb_001417_090 Hb_004031_050 Hb_004031_050 Hb_004970_100--Hb_004031_050 Hb_011355_020 Hb_011355_020 Hb_006026_020--Hb_011355_020 Hb_006026_020--Hb_004031_050 Hb_006026_020--Hb_000373_260 Hb_002897_030 Hb_002897_030 Hb_006026_020--Hb_002897_030 Hb_000149_020 Hb_000149_020 Hb_006026_020--Hb_000149_020 Hb_084304_010 Hb_084304_010 Hb_003777_150--Hb_084304_010 Hb_003427_070 Hb_003427_070 Hb_003777_150--Hb_003427_070 Hb_000628_060 Hb_000628_060 Hb_003777_150--Hb_000628_060 Hb_004474_020 Hb_004474_020 Hb_003777_150--Hb_004474_020 Hb_069384_010 Hb_069384_010 Hb_003777_150--Hb_069384_010 Hb_005214_050--Hb_004031_050 Hb_005214_050--Hb_000373_260 Hb_005214_050--Hb_011355_020 Hb_000568_020 Hb_000568_020 Hb_005214_050--Hb_000568_020 Hb_005214_050--Hb_002897_030 Hb_000373_260--Hb_011355_020 Hb_000373_260--Hb_004031_050 Hb_000373_260--Hb_000149_020 Hb_120040_010 Hb_120040_010 Hb_001417_090--Hb_120040_010 Hb_001856_130 Hb_001856_130 Hb_001417_090--Hb_001856_130 Hb_000739_190 Hb_000739_190 Hb_001417_090--Hb_000739_190 Hb_000614_120 Hb_000614_120 Hb_001417_090--Hb_000614_120 Hb_000120_560 Hb_000120_560 Hb_001417_090--Hb_000120_560 Hb_004031_050--Hb_011355_020 Hb_004031_050--Hb_002897_030 Hb_002522_040 Hb_002522_040 Hb_004031_050--Hb_002522_040 Hb_001198_180 Hb_001198_180 Hb_004031_050--Hb_001198_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.139513 3.5938 4.61504 19.6698 0.0502487 0.128632
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.54586 1.10495

CAGE analysis