Hb_004987_020

Information

Type -
Description -
Location Contig4987: 22574-23763
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004987_020 0.0 - - -
2 Hb_000203_270 0.0819886744 - - alpha-xylosidase, putative [Ricinus communis]
3 Hb_005539_310 0.1048498373 - - basic helix-loop-helix-containing protein, putative [Ricinus communis]
4 Hb_000679_100 0.1071126863 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g25400 isoform X1 [Jatropha curcas]
5 Hb_000085_260 0.1074217594 - - glycerophosphoryl diester phosphodiesterase, putative [Ricinus communis]
6 Hb_000395_040 0.1075587447 - - PREDICTED: uncharacterized protein LOC105645576 [Jatropha curcas]
7 Hb_000890_030 0.1102729009 - - plastid CUL1 [Hevea brasiliensis]
8 Hb_002486_050 0.1109341833 - - Multiple inositol polyphosphate phosphatase 1 precursor, putative [Ricinus communis]
9 Hb_003599_030 0.1110598303 - - PREDICTED: glucan endo-1,3-beta-glucosidase 4 isoform X3 [Jatropha curcas]
10 Hb_000836_550 0.1118241334 - - PREDICTED: reticulon-like protein B5 [Jatropha curcas]
11 Hb_017948_030 0.1122938261 - - PREDICTED: uncharacterized protein LOC105639493 [Jatropha curcas]
12 Hb_000098_050 0.1125996945 - - BnaCnng11900D [Brassica napus]
13 Hb_000579_130 0.1128162987 - - ubiquitin-protein ligase, putative [Ricinus communis]
14 Hb_000418_010 0.1139256713 - - PREDICTED: repressor of RNA polymerase III transcription MAF1 homolog [Jatropha curcas]
15 Hb_007286_020 0.1178679675 - - hypothetical protein L484_010675 [Morus notabilis]
16 Hb_009247_010 0.1192917843 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
17 Hb_004480_020 0.1193582972 - - PREDICTED: uncharacterized protein LOC105637166 [Jatropha curcas]
18 Hb_000912_100 0.1203081455 - - PREDICTED: CMP-sialic acid transporter 3-like isoform X2 [Elaeis guineensis]
19 Hb_001097_040 0.1213255876 - - PREDICTED: probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B [Jatropha curcas]
20 Hb_010042_030 0.1226547303 - - PREDICTED: UDP-N-acetylglucosamine diphosphorylase 1 [Jatropha curcas]

Gene co-expression network

sample Hb_004987_020 Hb_004987_020 Hb_000203_270 Hb_000203_270 Hb_004987_020--Hb_000203_270 Hb_005539_310 Hb_005539_310 Hb_004987_020--Hb_005539_310 Hb_000679_100 Hb_000679_100 Hb_004987_020--Hb_000679_100 Hb_000085_260 Hb_000085_260 Hb_004987_020--Hb_000085_260 Hb_000395_040 Hb_000395_040 Hb_004987_020--Hb_000395_040 Hb_000890_030 Hb_000890_030 Hb_004987_020--Hb_000890_030 Hb_002849_070 Hb_002849_070 Hb_000203_270--Hb_002849_070 Hb_002739_120 Hb_002739_120 Hb_000203_270--Hb_002739_120 Hb_000200_170 Hb_000200_170 Hb_000203_270--Hb_000200_170 Hb_001135_030 Hb_001135_030 Hb_000203_270--Hb_001135_030 Hb_003599_030 Hb_003599_030 Hb_000203_270--Hb_003599_030 Hb_001217_040 Hb_001217_040 Hb_005539_310--Hb_001217_040 Hb_118507_010 Hb_118507_010 Hb_005539_310--Hb_118507_010 Hb_000991_040 Hb_000991_040 Hb_005539_310--Hb_000991_040 Hb_063716_090 Hb_063716_090 Hb_005539_310--Hb_063716_090 Hb_000260_600 Hb_000260_600 Hb_005539_310--Hb_000260_600 Hb_000679_100--Hb_000085_260 Hb_001097_040 Hb_001097_040 Hb_000679_100--Hb_001097_040 Hb_007286_020 Hb_007286_020 Hb_000679_100--Hb_007286_020 Hb_001051_070 Hb_001051_070 Hb_000679_100--Hb_001051_070 Hb_000023_300 Hb_000023_300 Hb_000679_100--Hb_000023_300 Hb_010042_030 Hb_010042_030 Hb_000679_100--Hb_010042_030 Hb_001159_030 Hb_001159_030 Hb_000085_260--Hb_001159_030 Hb_000085_260--Hb_010042_030 Hb_005062_110 Hb_005062_110 Hb_000085_260--Hb_005062_110 Hb_000098_050 Hb_000098_050 Hb_000085_260--Hb_000098_050 Hb_000503_020 Hb_000503_020 Hb_000085_260--Hb_000503_020 Hb_001691_040 Hb_001691_040 Hb_000395_040--Hb_001691_040 Hb_005535_080 Hb_005535_080 Hb_000395_040--Hb_005535_080 Hb_000815_240 Hb_000815_240 Hb_000395_040--Hb_000815_240 Hb_005381_020 Hb_005381_020 Hb_000395_040--Hb_005381_020 Hb_000523_030 Hb_000523_030 Hb_000395_040--Hb_000523_030 Hb_000395_040--Hb_000890_030 Hb_000580_030 Hb_000580_030 Hb_000890_030--Hb_000580_030 Hb_012760_030 Hb_012760_030 Hb_000890_030--Hb_012760_030 Hb_016461_020 Hb_016461_020 Hb_000890_030--Hb_016461_020 Hb_000890_030--Hb_000098_050 Hb_044486_020 Hb_044486_020 Hb_000890_030--Hb_044486_020 Hb_000805_210 Hb_000805_210 Hb_000890_030--Hb_000805_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.969026 3.93366 2.14447 5.83958 0.960076 1.9193
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.981149 1.02933 1.12855 2.12529 1.63855

CAGE analysis