Hb_004994_030

Information

Type transcription factor
Description TF Family: HB
Location Contig4994: 18090-24023
Sequence    

Annotation

kegg
ID pop:POPTR_0014s07130g
description POPTRDRAFT_774292; homeodomain family protein
nr
ID XP_012083470.1
description PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Jatropha curcas]
swissprot
ID Q0WV12
description Homeobox-leucine zipper protein ANTHOCYANINLESS 2 OS=Arabidopsis thaliana GN=ANL2 PE=2 SV=1
trembl
ID A0A067JXS1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14453 PE=4 SV=1
Gene Ontology
ID GO:0005634
description homeobox-leucine zipper protein anthocyaninless 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45617: 17792-23852
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004994_030 0.0 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Jatropha curcas]
2 Hb_000270_090 0.0467182893 - - nitrate transporter, putative [Ricinus communis]
3 Hb_001321_010 0.0469457218 - - HIGH-CHLOROPHYLL-FLUORESCENCE 101 family protein [Populus trichocarpa]
4 Hb_003937_010 0.0656699639 - - hypothetical protein JCGZ_20930 [Jatropha curcas]
5 Hb_011104_020 0.0660190913 - - PREDICTED: ABC transporter B family member 2-like [Jatropha curcas]
6 Hb_012389_010 0.0660559647 - - hypothetical protein POPTR_0018s11820g [Populus trichocarpa]
7 Hb_002073_150 0.0759387879 transcription factor TF Family: MYB-related PREDICTED: transcription factor MYB1R1 [Jatropha curcas]
8 Hb_002007_220 0.0767010203 - - PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Jatropha curcas]
9 Hb_000155_020 0.0814011554 - - PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic isoform X1 [Jatropha curcas]
10 Hb_000483_430 0.0823106973 - - -
11 Hb_018591_020 0.0844255192 - - Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast precursor, putative [Ricinus communis]
12 Hb_004970_060 0.0917637568 - - PREDICTED: uncharacterized protein LOC100259061 [Vitis vinifera]
13 Hb_000140_460 0.0923689305 - - PREDICTED: uncharacterized protein LOC105628417 [Jatropha curcas]
14 Hb_005211_080 0.0925135546 - - hypothetical protein POPTR_0010s13740g [Populus trichocarpa]
15 Hb_001051_010 0.0927831206 - - PREDICTED: putative cyclic nucleotide-gated ion channel 15 [Jatropha curcas]
16 Hb_001699_140 0.0931723333 - - PREDICTED: ferredoxin--NADP reductase, leaf isozyme, chloroplastic [Jatropha curcas]
17 Hb_006618_110 0.0940422485 - - -
18 Hb_033363_040 0.09458521 - - PREDICTED: probable galacturonosyltransferase-like 3 [Jatropha curcas]
19 Hb_000239_050 0.0962659854 - - PREDICTED: cyclin-D5-1-like [Jatropha curcas]
20 Hb_003494_090 0.0975437211 transcription factor TF Family: MYB myb family transcription factor family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_004994_030 Hb_004994_030 Hb_000270_090 Hb_000270_090 Hb_004994_030--Hb_000270_090 Hb_001321_010 Hb_001321_010 Hb_004994_030--Hb_001321_010 Hb_003937_010 Hb_003937_010 Hb_004994_030--Hb_003937_010 Hb_011104_020 Hb_011104_020 Hb_004994_030--Hb_011104_020 Hb_012389_010 Hb_012389_010 Hb_004994_030--Hb_012389_010 Hb_002073_150 Hb_002073_150 Hb_004994_030--Hb_002073_150 Hb_000270_090--Hb_001321_010 Hb_000270_090--Hb_011104_020 Hb_001699_140 Hb_001699_140 Hb_000270_090--Hb_001699_140 Hb_002007_220 Hb_002007_220 Hb_000270_090--Hb_002007_220 Hb_002407_090 Hb_002407_090 Hb_000270_090--Hb_002407_090 Hb_001321_010--Hb_011104_020 Hb_001321_010--Hb_002007_220 Hb_018591_020 Hb_018591_020 Hb_001321_010--Hb_018591_020 Hb_001321_010--Hb_002407_090 Hb_006618_110 Hb_006618_110 Hb_003937_010--Hb_006618_110 Hb_063405_010 Hb_063405_010 Hb_003937_010--Hb_063405_010 Hb_000155_020 Hb_000155_020 Hb_003937_010--Hb_000155_020 Hb_001014_240 Hb_001014_240 Hb_003937_010--Hb_001014_240 Hb_003777_090 Hb_003777_090 Hb_003937_010--Hb_003777_090 Hb_011104_020--Hb_002073_150 Hb_000483_430 Hb_000483_430 Hb_011104_020--Hb_000483_430 Hb_011104_020--Hb_012389_010 Hb_012389_010--Hb_002073_150 Hb_000041_210 Hb_000041_210 Hb_012389_010--Hb_000041_210 Hb_131876_010 Hb_131876_010 Hb_012389_010--Hb_131876_010 Hb_000675_010 Hb_000675_010 Hb_012389_010--Hb_000675_010 Hb_001248_070 Hb_001248_070 Hb_002073_150--Hb_001248_070 Hb_002073_150--Hb_131876_010 Hb_002073_150--Hb_000483_430 Hb_069696_020 Hb_069696_020 Hb_002073_150--Hb_069696_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.67185 21.8474 9.58506 0 0.0226894
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0225054 0.0354219 0.0169999 2.05919 27.313

CAGE analysis