Hb_004994_070

Information

Type -
Description -
Location Contig4994: 47706-48284
Sequence    

Annotation

kegg
ID rcu:RCOM_1614400
description hypothetical protein
nr
ID XP_012083463.1
description PREDICTED: BON1-associated protein 2 [Jatropha curcas]
swissprot
ID Q58FX0
description BON1-associated protein 2 OS=Arabidopsis thaliana GN=BAP2 PE=1 SV=1
trembl
ID A0A067JXI1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14447 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004994_070 0.0 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
2 Hb_006519_010 0.0591453644 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At4g27220 [Vitis vinifera]
3 Hb_093204_010 0.0608834285 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000959_290 0.0613563369 - - PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas]
5 Hb_000333_150 0.0733328722 - - hypothetical protein RCOM_0711500 [Ricinus communis]
6 Hb_011111_010 0.0822924736 - - PREDICTED: putative RING-H2 finger protein ATL21A [Jatropha curcas]
7 Hb_002572_060 0.0853087602 - - conserved hypothetical protein [Ricinus communis]
8 Hb_004767_040 0.0976393932 - - Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis]
9 Hb_001190_020 0.0978020752 - - ankyrin repeat-containing protein, putative [Ricinus communis]
10 Hb_000261_540 0.1056867352 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Jatropha curcas]
11 Hb_000336_170 0.1060541166 - - Polcalcin Jun o, putative [Ricinus communis]
12 Hb_143232_020 0.10966668 - - hypothetical protein JCGZ_20467 [Jatropha curcas]
13 Hb_011671_290 0.1122231687 transcription factor TF Family: ERF hypothetical protein JCGZ_26299 [Jatropha curcas]
14 Hb_078477_010 0.1143303674 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
15 Hb_000610_030 0.1198020141 - - hypothetical protein MIMGU_mgv1a0038491mg, partial [Erythranthe guttata]
16 Hb_001623_020 0.1201184259 - - 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
17 Hb_008978_010 0.1214501287 - - transmembrane receptor, putative [Ricinus communis]
18 Hb_120917_010 0.1225472608 - - PREDICTED: receptor protein kinase CLAVATA1 [Jatropha curcas]
19 Hb_033153_010 0.1243145086 - - PREDICTED: MLO-like protein 12 [Jatropha curcas]
20 Hb_044026_010 0.1251785886 - - PREDICTED: cytochrome P450 93A3-like [Jatropha curcas]

Gene co-expression network

sample Hb_004994_070 Hb_004994_070 Hb_006519_010 Hb_006519_010 Hb_004994_070--Hb_006519_010 Hb_093204_010 Hb_093204_010 Hb_004994_070--Hb_093204_010 Hb_000959_290 Hb_000959_290 Hb_004994_070--Hb_000959_290 Hb_000333_150 Hb_000333_150 Hb_004994_070--Hb_000333_150 Hb_011111_010 Hb_011111_010 Hb_004994_070--Hb_011111_010 Hb_002572_060 Hb_002572_060 Hb_004994_070--Hb_002572_060 Hb_006519_010--Hb_000959_290 Hb_001190_020 Hb_001190_020 Hb_006519_010--Hb_001190_020 Hb_006519_010--Hb_093204_010 Hb_004767_040 Hb_004767_040 Hb_006519_010--Hb_004767_040 Hb_006519_010--Hb_002572_060 Hb_093204_010--Hb_011111_010 Hb_093204_010--Hb_000959_290 Hb_093204_010--Hb_004767_040 Hb_093204_010--Hb_002572_060 Hb_000959_290--Hb_001190_020 Hb_000959_290--Hb_002572_060 Hb_000959_290--Hb_000333_150 Hb_008978_010 Hb_008978_010 Hb_000333_150--Hb_008978_010 Hb_044026_010 Hb_044026_010 Hb_000333_150--Hb_044026_010 Hb_078477_010 Hb_078477_010 Hb_000333_150--Hb_078477_010 Hb_000333_150--Hb_093204_010 Hb_143232_020 Hb_143232_020 Hb_011111_010--Hb_143232_020 Hb_073423_010 Hb_073423_010 Hb_011111_010--Hb_073423_010 Hb_004117_360 Hb_004117_360 Hb_011111_010--Hb_004117_360 Hb_002486_030 Hb_002486_030 Hb_011111_010--Hb_002486_030 Hb_008579_010 Hb_008579_010 Hb_011111_010--Hb_008579_010 Hb_000610_030 Hb_000610_030 Hb_002572_060--Hb_000610_030 Hb_013726_100 Hb_013726_100 Hb_002572_060--Hb_013726_100 Hb_011671_290 Hb_011671_290 Hb_002572_060--Hb_011671_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 56.5714 1.51926 3.7084 0.0922407 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.106522 0 0 0.240838 0

CAGE analysis