Hb_004994_120

Information

Type -
Description -
Location Contig4994: 61889-72923
Sequence    

Annotation

kegg
ID rcu:RCOM_1614450
description acyl-CoA thioesterase, putative
nr
ID XP_012083454.1
description PREDICTED: acyl-coenzyme A thioesterase 13-like isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JXQ8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14443 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45629: 61910-72986 , PASA_asmbl_45630: 70569-72941
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004994_120 0.0 - - PREDICTED: acyl-coenzyme A thioesterase 13-like isoform X1 [Jatropha curcas]
2 Hb_004619_060 0.0667806391 - - PREDICTED: uncharacterized protein At1g10890-like [Nelumbo nucifera]
3 Hb_007283_010 0.0756425198 - - PREDICTED: pre-mRNA-processing protein 40C isoform X1 [Jatropha curcas]
4 Hb_005288_070 0.0761776354 transcription factor TF Family: G2-like DNA binding protein, putative [Ricinus communis]
5 Hb_000085_210 0.0797825476 - - DNA topoisomerase type I, putative [Ricinus communis]
6 Hb_001623_270 0.0857798859 transcription factor TF Family: PHD Inhibitor of growth protein, putative [Ricinus communis]
7 Hb_030414_040 0.0885729683 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHH3 isoform X1 [Jatropha curcas]
8 Hb_000749_010 0.0945856169 - - PREDICTED: non-canonical poly(A) RNA polymerase PAPD5 isoform X1 [Jatropha curcas]
9 Hb_000795_040 0.0967321275 - - PREDICTED: sister chromatid cohesion protein PDS5 homolog A isoform X1 [Jatropha curcas]
10 Hb_001541_050 0.0968815528 - - PREDICTED: serine/threonine-protein kinase AFC2-like [Jatropha curcas]
11 Hb_113853_010 0.097211038 - - 50S ribosomal protein L2, putative [Ricinus communis]
12 Hb_000111_170 0.0977614826 - - PREDICTED: uncharacterized protein LOC105631234 isoform X1 [Jatropha curcas]
13 Hb_001089_030 0.0985691879 - - PREDICTED: uncharacterized protein LOC105638026 [Jatropha curcas]
14 Hb_065525_080 0.0996426161 - - PREDICTED: ubiquitin-conjugating enzyme E2 14 [Populus euphratica]
15 Hb_000282_090 0.1019677996 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]
16 Hb_007044_110 0.1023027953 - - nucleic acid binding protein, putative [Ricinus communis]
17 Hb_000003_400 0.1025959325 - - short chain alcohol dehydrogenase, putative [Ricinus communis]
18 Hb_000120_210 0.1054567456 - - PREDICTED: uncharacterized protein LOC105630189 [Jatropha curcas]
19 Hb_002876_300 0.1054986068 - - PREDICTED: histidinol-phosphate aminotransferase, chloroplastic-like [Jatropha curcas]
20 Hb_183433_010 0.1059518712 - - PREDICTED: FAD synthase isoform X3 [Jatropha curcas]

Gene co-expression network

sample Hb_004994_120 Hb_004994_120 Hb_004619_060 Hb_004619_060 Hb_004994_120--Hb_004619_060 Hb_007283_010 Hb_007283_010 Hb_004994_120--Hb_007283_010 Hb_005288_070 Hb_005288_070 Hb_004994_120--Hb_005288_070 Hb_000085_210 Hb_000085_210 Hb_004994_120--Hb_000085_210 Hb_001623_270 Hb_001623_270 Hb_004994_120--Hb_001623_270 Hb_030414_040 Hb_030414_040 Hb_004994_120--Hb_030414_040 Hb_004619_060--Hb_007283_010 Hb_004619_060--Hb_000085_210 Hb_055235_020 Hb_055235_020 Hb_004619_060--Hb_055235_020 Hb_007044_110 Hb_007044_110 Hb_004619_060--Hb_007044_110 Hb_003093_040 Hb_003093_040 Hb_004619_060--Hb_003093_040 Hb_007283_010--Hb_005288_070 Hb_000457_230 Hb_000457_230 Hb_007283_010--Hb_000457_230 Hb_007283_010--Hb_030414_040 Hb_004324_330 Hb_004324_330 Hb_007283_010--Hb_004324_330 Hb_031284_010 Hb_031284_010 Hb_007283_010--Hb_031284_010 Hb_000205_260 Hb_000205_260 Hb_007283_010--Hb_000205_260 Hb_005288_070--Hb_030414_040 Hb_005288_070--Hb_007044_110 Hb_005288_070--Hb_000205_260 Hb_005288_070--Hb_000457_230 Hb_000111_170 Hb_000111_170 Hb_005288_070--Hb_000111_170 Hb_000795_040 Hb_000795_040 Hb_000085_210--Hb_000795_040 Hb_000085_210--Hb_000111_170 Hb_000085_210--Hb_005288_070 Hb_000676_330 Hb_000676_330 Hb_000085_210--Hb_000676_330 Hb_017469_110 Hb_017469_110 Hb_000085_210--Hb_017469_110 Hb_001439_220 Hb_001439_220 Hb_000085_210--Hb_001439_220 Hb_000176_020 Hb_000176_020 Hb_001623_270--Hb_000176_020 Hb_183433_010 Hb_183433_010 Hb_001623_270--Hb_183433_010 Hb_000789_320 Hb_000789_320 Hb_001623_270--Hb_000789_320 Hb_171900_090 Hb_171900_090 Hb_001623_270--Hb_171900_090 Hb_014834_150 Hb_014834_150 Hb_001623_270--Hb_014834_150 Hb_000230_400 Hb_000230_400 Hb_001623_270--Hb_000230_400 Hb_001158_160 Hb_001158_160 Hb_030414_040--Hb_001158_160 Hb_000120_210 Hb_000120_210 Hb_030414_040--Hb_000120_210 Hb_004096_240 Hb_004096_240 Hb_030414_040--Hb_004096_240 Hb_000254_100 Hb_000254_100 Hb_030414_040--Hb_000254_100 Hb_030414_040--Hb_000111_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.48994 9.29555 10.7042 5.96662 5.54965 5.30436
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.24237 7.44614 1.89598 6.38688 11.5836

CAGE analysis