Hb_004994_310

Information

Type -
Description -
Location Contig4994: 253161-253724
Sequence    

Annotation

kegg
ID rcu:RCOM_0605920
description Kiwellin, putative
nr
ID XP_002529817.1
description Kiwellin, putative [Ricinus communis]
swissprot
ID Q9FWU1
description Putative ripening-related protein 4 OS=Oryza sativa subsp. japonica GN=Os10g0490666 PE=3 SV=2
trembl
ID B9SUZ8
description Kiwellin, putative OS=Ricinus communis GN=RCOM_0605920 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004994_310 0.0 - - Kiwellin, putative [Ricinus communis]
2 Hb_000165_030 0.0997278875 - - PREDICTED: uncharacterized protein LOC105645673 isoform X1 [Jatropha curcas]
3 Hb_000977_130 0.1013169994 - - PREDICTED: U6 snRNA-associated Sm-like protein LSm6 [Populus euphratica]
4 Hb_002997_170 0.1067096558 - - PREDICTED: uncharacterized protein LOC105131887 [Populus euphratica]
5 Hb_057183_040 0.1084749829 - - PREDICTED: WPP domain-interacting tail-anchored protein 2 [Jatropha curcas]
6 Hb_001623_370 0.1095637766 - - conserved hypothetical protein [Ricinus communis]
7 Hb_004137_030 0.1113397112 - - conserved hypothetical protein [Ricinus communis]
8 Hb_012340_030 0.1140537887 - - PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Jatropha curcas]
9 Hb_168918_020 0.1162265349 - - pectin acetylesterase, putative [Ricinus communis]
10 Hb_000028_470 0.1174484398 transcription factor TF Family: GNAT N-acetyltransferase, putative [Ricinus communis]
11 Hb_004449_220 0.1190092635 transcription factor TF Family: C2H2 PREDICTED: uncharacterized zinc finger protein At4g06634 [Jatropha curcas]
12 Hb_001823_100 0.1197257081 - - PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis vinifera]
13 Hb_000120_240 0.1202613456 - - PREDICTED: uncharacterized protein LOC105630166 [Jatropha curcas]
14 Hb_000107_390 0.1215682858 - - PREDICTED: uncharacterized protein LOC100245962 [Vitis vinifera]
15 Hb_005843_110 0.1231073522 - - Caltractin, putative [Ricinus communis]
16 Hb_003752_110 0.1254295524 - - -
17 Hb_002377_040 0.1269045855 - - serine/threonine protein kinase, putative [Ricinus communis]
18 Hb_004502_030 0.1275676026 - - unknown [Populus trichocarpa]
19 Hb_000905_190 0.1278937504 - - PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Elaeis guineensis]
20 Hb_000345_560 0.1285189078 - - -

Gene co-expression network

sample Hb_004994_310 Hb_004994_310 Hb_000165_030 Hb_000165_030 Hb_004994_310--Hb_000165_030 Hb_000977_130 Hb_000977_130 Hb_004994_310--Hb_000977_130 Hb_002997_170 Hb_002997_170 Hb_004994_310--Hb_002997_170 Hb_057183_040 Hb_057183_040 Hb_004994_310--Hb_057183_040 Hb_001623_370 Hb_001623_370 Hb_004994_310--Hb_001623_370 Hb_004137_030 Hb_004137_030 Hb_004994_310--Hb_004137_030 Hb_000162_090 Hb_000162_090 Hb_000165_030--Hb_000162_090 Hb_000749_150 Hb_000749_150 Hb_000165_030--Hb_000749_150 Hb_000165_030--Hb_002997_170 Hb_000905_190 Hb_000905_190 Hb_000165_030--Hb_000905_190 Hb_000156_140 Hb_000156_140 Hb_000165_030--Hb_000156_140 Hb_109842_010 Hb_109842_010 Hb_000165_030--Hb_109842_010 Hb_000977_130--Hb_002997_170 Hb_000690_080 Hb_000690_080 Hb_000977_130--Hb_000690_080 Hb_001741_140 Hb_001741_140 Hb_000977_130--Hb_001741_140 Hb_009767_120 Hb_009767_120 Hb_000977_130--Hb_009767_120 Hb_011794_090 Hb_011794_090 Hb_000977_130--Hb_011794_090 Hb_000107_050 Hb_000107_050 Hb_000977_130--Hb_000107_050 Hb_002997_170--Hb_000905_190 Hb_002997_170--Hb_001741_140 Hb_000997_020 Hb_000997_020 Hb_002997_170--Hb_000997_020 Hb_168918_020 Hb_168918_020 Hb_002997_170--Hb_168918_020 Hb_012340_030 Hb_012340_030 Hb_002997_170--Hb_012340_030 Hb_008453_150 Hb_008453_150 Hb_057183_040--Hb_008453_150 Hb_000028_470 Hb_000028_470 Hb_057183_040--Hb_000028_470 Hb_001140_200 Hb_001140_200 Hb_057183_040--Hb_001140_200 Hb_001823_100 Hb_001823_100 Hb_057183_040--Hb_001823_100 Hb_000120_240 Hb_000120_240 Hb_057183_040--Hb_000120_240 Hb_003060_070 Hb_003060_070 Hb_057183_040--Hb_003060_070 Hb_000714_020 Hb_000714_020 Hb_001623_370--Hb_000714_020 Hb_001514_020 Hb_001514_020 Hb_001623_370--Hb_001514_020 Hb_004502_030 Hb_004502_030 Hb_001623_370--Hb_004502_030 Hb_011609_030 Hb_011609_030 Hb_001623_370--Hb_011609_030 Hb_007992_030 Hb_007992_030 Hb_001623_370--Hb_007992_030 Hb_001663_110 Hb_001663_110 Hb_001623_370--Hb_001663_110 Hb_073973_170 Hb_073973_170 Hb_004137_030--Hb_073973_170 Hb_002619_010 Hb_002619_010 Hb_004137_030--Hb_002619_010 Hb_004137_030--Hb_001623_370 Hb_004137_030--Hb_000714_020 Hb_001956_050 Hb_001956_050 Hb_004137_030--Hb_001956_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.13428 0.513024 1.42486 0.467375 2.56104 4.80143
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.32826 2.96216 2.11273 0.394575 0.50053

CAGE analysis