Hb_005016_090

Information

Type -
Description -
Location Contig5016: 97425-98630
Sequence    

Annotation

kegg
ID rcu:RCOM_1355010
description acylphosphatase, putative
nr
ID XP_012082398.1
description PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]
swissprot
ID A5VFP2
description Acylphosphatase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=acyP PE=3 SV=1
trembl
ID A0A067KA32
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16534 PE=3 SV=1
Gene Ontology
ID GO:0003998
description acylphosphatase family isoform partial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45884: 97703-98642 , PASA_asmbl_45887: 98266-115048 , PASA_asmbl_45888: 97703-115343
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005016_090 0.0 - - PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]
2 Hb_010368_020 0.0653569253 - - PREDICTED: uncharacterized protein LOC105630301 [Jatropha curcas]
3 Hb_001564_130 0.0863610466 - - PREDICTED: single-stranded DNA-binding protein, mitochondrial isoform X1 [Jatropha curcas]
4 Hb_007763_040 0.0931064545 - - -
5 Hb_002346_020 0.0947427566 - - -
6 Hb_001586_040 0.0970119966 - - hypothetical protein JCGZ_17187 [Jatropha curcas]
7 Hb_003683_050 0.1019779157 - - PREDICTED: uncharacterized protein LOC105650619 [Jatropha curcas]
8 Hb_001348_070 0.103219118 - - Uncharacterized protein isoform 1 [Theobroma cacao]
9 Hb_002154_120 0.103578441 - - PREDICTED: uncharacterized protein LOC105630563 [Jatropha curcas]
10 Hb_000487_110 0.1038345477 - - PREDICTED: cyclin-T1-3-like [Jatropha curcas]
11 Hb_005618_160 0.1040370728 - - PREDICTED: putative proline--tRNA ligase C19C7.06 [Jatropha curcas]
12 Hb_012340_080 0.1052041141 - - protein farnesyltransferase alpha subunit, putative [Ricinus communis]
13 Hb_001512_060 0.1060681016 - - PREDICTED: pentatricopeptide repeat-containing protein At4g35850, mitochondrial [Jatropha curcas]
14 Hb_012022_160 0.1061175201 - - PREDICTED: uncharacterized protein LOC105646602 [Jatropha curcas]
15 Hb_054865_100 0.107637164 - - PREDICTED: probable protein S-acyltransferase 12 isoform X1 [Jatropha curcas]
16 Hb_047503_010 0.1082051707 - - PREDICTED: putative protein N-methyltransferase YNL024C [Jatropha curcas]
17 Hb_001352_090 0.1083717649 - - PREDICTED: UPF0161 protein At3g09310 [Jatropha curcas]
18 Hb_003292_040 0.1087677061 transcription factor TF Family: MBF1 uncharacterized protein LOC100500420 [Glycine max]
19 Hb_000236_240 0.1090338371 - - Pre-mRNA-splicing factor cwc15, putative [Ricinus communis]
20 Hb_000275_170 0.110458955 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-3b-like [Jatropha curcas]

Gene co-expression network

sample Hb_005016_090 Hb_005016_090 Hb_010368_020 Hb_010368_020 Hb_005016_090--Hb_010368_020 Hb_001564_130 Hb_001564_130 Hb_005016_090--Hb_001564_130 Hb_007763_040 Hb_007763_040 Hb_005016_090--Hb_007763_040 Hb_002346_020 Hb_002346_020 Hb_005016_090--Hb_002346_020 Hb_001586_040 Hb_001586_040 Hb_005016_090--Hb_001586_040 Hb_003683_050 Hb_003683_050 Hb_005016_090--Hb_003683_050 Hb_010368_020--Hb_001564_130 Hb_000771_080 Hb_000771_080 Hb_010368_020--Hb_000771_080 Hb_000670_020 Hb_000670_020 Hb_010368_020--Hb_000670_020 Hb_001348_070 Hb_001348_070 Hb_010368_020--Hb_001348_070 Hb_001195_760 Hb_001195_760 Hb_010368_020--Hb_001195_760 Hb_003292_040 Hb_003292_040 Hb_001564_130--Hb_003292_040 Hb_001564_130--Hb_000670_020 Hb_001512_060 Hb_001512_060 Hb_001564_130--Hb_001512_060 Hb_011970_030 Hb_011970_030 Hb_001564_130--Hb_011970_030 Hb_001564_130--Hb_001348_070 Hb_007763_040--Hb_000670_020 Hb_007763_040--Hb_003683_050 Hb_007763_040--Hb_010368_020 Hb_000714_030 Hb_000714_030 Hb_007763_040--Hb_000714_030 Hb_007763_040--Hb_001564_130 Hb_047503_010 Hb_047503_010 Hb_002346_020--Hb_047503_010 Hb_002346_020--Hb_001512_060 Hb_001552_020 Hb_001552_020 Hb_002346_020--Hb_001552_020 Hb_002928_130 Hb_002928_130 Hb_002346_020--Hb_002928_130 Hb_000096_070 Hb_000096_070 Hb_002346_020--Hb_000096_070 Hb_002027_250 Hb_002027_250 Hb_002346_020--Hb_002027_250 Hb_000649_070 Hb_000649_070 Hb_001586_040--Hb_000649_070 Hb_000174_110 Hb_000174_110 Hb_001586_040--Hb_000174_110 Hb_005618_160 Hb_005618_160 Hb_001586_040--Hb_005618_160 Hb_002739_050 Hb_002739_050 Hb_001586_040--Hb_002739_050 Hb_001329_130 Hb_001329_130 Hb_001586_040--Hb_001329_130 Hb_010068_040 Hb_010068_040 Hb_001586_040--Hb_010068_040 Hb_001481_170 Hb_001481_170 Hb_003683_050--Hb_001481_170 Hb_003683_050--Hb_001195_760 Hb_001936_080 Hb_001936_080 Hb_003683_050--Hb_001936_080 Hb_003683_050--Hb_011970_030 Hb_003683_050--Hb_000670_020 Hb_000085_180 Hb_000085_180 Hb_003683_050--Hb_000085_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
40.3524 22.5702 25.8178 18.2262 65.437 27.6253
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
33.7429 54.1867 27.7141 10.703 20.3465

CAGE analysis