Hb_005031_070

Information

Type -
Description -
Location Contig5031: 119396-120876
Sequence    

Annotation

kegg
ID -
description -
nr
ID Q39967.3
description RecName: Full=Major latex allergen Hev b 5; AltName: Allergen=Hev b 5 [Hevea brasiliensis]
swissprot
ID Q39967
description Major latex allergen Hev b 5 OS=Hevea brasiliensis PE=1 SV=3
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45915: 119450-120925
cDNA
(Sanger)
(ID:Location)		 001_O18.ab1: 119450-120765 , 004_D16.ab1: 119454-120756 , 005_J23.ab1: 119450-120799 , 007_M23.ab1: 119450-120760 , 009_M03.ab1: 119449-120698 , 013_O05.ab1: 119450-120757 , 013_O09.ab1: 119450-120772 , 015_C16.ab1: 119450-120675 , 016_I17.ab1: 119453-120402 , 019_P15.ab1: 119450-120734 , 020_I23.ab1: 119450-120712 , 024_F13.ab1: 119622-120566 , 024_H07.ab1: 119450-120625 , 025_K19.ab1: 119460-120756 , 027_B13.ab1: 119450-120705 , 030_A18.ab1: 119450-120737 , 030_H15.ab1: 119455-120710 , 031_B07.ab1: 119453-120787 , 031_O04.ab1: 119453-120790 , 033_O23.ab1: 119450-120714 , 033_P07.ab1: 119450-120755 , 034_E09.ab1: 119522-120790 , 034_I15.ab1: 119453-120782 , 036_O13.ab1: 119454-120692 , 038_E04.ab1: 119450-120551 , 038_P24.ab1: 119450-120774 , 041_N13.ab1: 119450-120729 , 042_K15.ab1: 119460-120765 , 044_M05.ab1: 119450-120712 , 053_H12.ab1: 119450-120727

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005031_070 0.0 - - RecName: Full=Major latex allergen Hev b 5; AltName: Allergen=Hev b 5 [Hevea brasiliensis]
2 Hb_004223_230 0.0893544182 transcription factor TF Family: ARF PREDICTED: auxin response factor 5 isoform X1 [Jatropha curcas]
3 Hb_004012_010 0.1115187378 - - PREDICTED: 40S ribosomal protein S15a-1-like [Gossypium raimondii]
4 Hb_002783_230 0.1119408028 - - neutral/alkaline invertase [Manihot esculenta]
5 Hb_000339_070 0.1208251457 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Populus euphratica]
6 Hb_002918_280 0.1214664795 - - hypothetical protein POPTR_0004s04800g [Populus trichocarpa]
7 Hb_169246_010 0.1248320055 - - conserved hypothetical protein [Ricinus communis]
8 Hb_004295_020 0.1261566854 - - thioredoxin II-type 1 [Hevea brasiliensis]
9 Hb_001623_330 0.1272970961 - - PREDICTED: uncharacterized protein LOC105638463 [Jatropha curcas]
10 Hb_001951_110 0.1313006679 - - PREDICTED: DNA-binding protein DDB_G0278111 [Jatropha curcas]
11 Hb_000680_150 0.1321026371 - - PREDICTED: protein STU1-like [Jatropha curcas]
12 Hb_007451_030 0.1361693835 - - PREDICTED: mitochondrial thiamine pyrophosphate carrier isoform X1 [Jatropha curcas]
13 Hb_000866_300 0.1363923943 - - hypothetical protein CICLE_v10023145mg [Citrus clementina]
14 Hb_000045_130 0.1368754269 - - 60S acidic ribosomal protein P0A [Hevea brasiliensis]
15 Hb_010883_210 0.138084719 - - PREDICTED: selenoprotein K [Jatropha curcas]
16 Hb_002374_490 0.138219664 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001804_040 0.1445970618 - - conserved hypothetical protein [Ricinus communis]
18 Hb_024835_030 0.1451542863 - - ubiquitin-conjugating enzyme E2, putative [Ricinus communis]
19 Hb_000260_050 0.1467499655 - - PREDICTED: serine/threonine-protein kinase AtPK2/AtPK19-like [Jatropha curcas]
20 Hb_027472_090 0.1477527061 - - -

Gene co-expression network

sample Hb_005031_070 Hb_005031_070 Hb_004223_230 Hb_004223_230 Hb_005031_070--Hb_004223_230 Hb_004012_010 Hb_004012_010 Hb_005031_070--Hb_004012_010 Hb_002783_230 Hb_002783_230 Hb_005031_070--Hb_002783_230 Hb_000339_070 Hb_000339_070 Hb_005031_070--Hb_000339_070 Hb_002918_280 Hb_002918_280 Hb_005031_070--Hb_002918_280 Hb_169246_010 Hb_169246_010 Hb_005031_070--Hb_169246_010 Hb_004295_020 Hb_004295_020 Hb_004223_230--Hb_004295_020 Hb_030620_010 Hb_030620_010 Hb_004223_230--Hb_030620_010 Hb_000117_040 Hb_000117_040 Hb_004223_230--Hb_000117_040 Hb_102864_010 Hb_102864_010 Hb_004223_230--Hb_102864_010 Hb_000313_380 Hb_000313_380 Hb_004223_230--Hb_000313_380 Hb_024835_030 Hb_024835_030 Hb_004012_010--Hb_024835_030 Hb_026198_050 Hb_026198_050 Hb_004012_010--Hb_026198_050 Hb_006775_080 Hb_006775_080 Hb_004012_010--Hb_006775_080 Hb_004920_040 Hb_004920_040 Hb_004012_010--Hb_004920_040 Hb_003185_020 Hb_003185_020 Hb_004012_010--Hb_003185_020 Hb_002762_060 Hb_002762_060 Hb_004012_010--Hb_002762_060 Hb_000714_020 Hb_000714_020 Hb_002783_230--Hb_000714_020 Hb_011930_010 Hb_011930_010 Hb_002783_230--Hb_011930_010 Hb_000481_010 Hb_000481_010 Hb_002783_230--Hb_000481_010 Hb_001514_020 Hb_001514_020 Hb_002783_230--Hb_001514_020 Hb_024399_010 Hb_024399_010 Hb_002783_230--Hb_024399_010 Hb_007245_090 Hb_007245_090 Hb_000339_070--Hb_007245_090 Hb_002849_210 Hb_002849_210 Hb_000339_070--Hb_002849_210 Hb_005214_110 Hb_005214_110 Hb_000339_070--Hb_005214_110 Hb_000339_070--Hb_004223_230 Hb_000116_470 Hb_000116_470 Hb_000339_070--Hb_000116_470 Hb_010883_210 Hb_010883_210 Hb_002918_280--Hb_010883_210 Hb_084934_010 Hb_084934_010 Hb_002918_280--Hb_084934_010 Hb_000221_100 Hb_000221_100 Hb_002918_280--Hb_000221_100 Hb_000680_150 Hb_000680_150 Hb_002918_280--Hb_000680_150 Hb_001386_130 Hb_001386_130 Hb_002918_280--Hb_001386_130 Hb_007617_020 Hb_007617_020 Hb_169246_010--Hb_007617_020 Hb_002374_490 Hb_002374_490 Hb_169246_010--Hb_002374_490 Hb_001623_330 Hb_001623_330 Hb_169246_010--Hb_001623_330 Hb_000866_300 Hb_000866_300 Hb_169246_010--Hb_000866_300 Hb_011805_080 Hb_011805_080 Hb_169246_010--Hb_011805_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11961.8 3848.56 468.366 1251.19 9114.27 6245.6
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8593.75 13155.6 5343.53 1237.19 58.6303

CAGE analysis