Hb_005050_030

Information

Type -
Description -
Location Contig5050: 29681-37135
Sequence    

Annotation

kegg
ID vvi:100252663
description wall-associated receptor kinase 2-like
nr
ID XP_012078380.1
description PREDICTED: wall-associated receptor kinase 2-like [Jatropha curcas]
swissprot
ID Q9LMP1
description Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1
trembl
ID A0A067KKU2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12187 PE=3 SV=1
Gene Ontology
ID GO:0000166
description wall-associated receptor kinase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005050_030 0.0 - - PREDICTED: wall-associated receptor kinase 2-like [Jatropha curcas]
2 Hb_002151_150 0.0612322792 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
3 Hb_040718_010 0.0874220365 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
4 Hb_000365_440 0.0896218866 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
5 Hb_002701_170 0.1052379449 - - PREDICTED: cytochrome P450 85A [Jatropha curcas]
6 Hb_000947_010 0.1069838667 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
7 Hb_009693_010 0.1099227377 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Gossypium raimondii]
8 Hb_001244_070 0.1204765858 - - hypothetical protein POPTR_0004s13470g [Populus trichocarpa]
9 Hb_006916_130 0.1207542354 - - PREDICTED: cytochrome P450 85A [Jatropha curcas]
10 Hb_174168_010 0.1240736378 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
11 Hb_023732_080 0.1256686055 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
12 Hb_001369_460 0.127937746 - - vacuolar invertase [Manihot esculenta]
13 Hb_006938_060 0.1283888926 - - nutrient reservoir, putative [Ricinus communis]
14 Hb_000560_060 0.1315991136 - - PREDICTED: endochitinase PR4-like [Jatropha curcas]
15 Hb_000880_040 0.1331534962 - - -
16 Hb_176680_010 0.1349521154 - - hypothetical protein JCGZ_22787 [Jatropha curcas]
17 Hb_010678_010 0.1388625626 - - PREDICTED: alpha-glucosidase-like [Jatropha curcas]
18 Hb_023771_030 0.1396724553 - - unnamed protein product [Vitis vinifera]
19 Hb_067558_010 0.140896827 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
20 Hb_119443_010 0.1413696718 - - hypothetical protein JCGZ_17348 [Jatropha curcas]

Gene co-expression network

sample Hb_005050_030 Hb_005050_030 Hb_002151_150 Hb_002151_150 Hb_005050_030--Hb_002151_150 Hb_040718_010 Hb_040718_010 Hb_005050_030--Hb_040718_010 Hb_000365_440 Hb_000365_440 Hb_005050_030--Hb_000365_440 Hb_002701_170 Hb_002701_170 Hb_005050_030--Hb_002701_170 Hb_000947_010 Hb_000947_010 Hb_005050_030--Hb_000947_010 Hb_009693_010 Hb_009693_010 Hb_005050_030--Hb_009693_010 Hb_002151_150--Hb_002701_170 Hb_002151_150--Hb_040718_010 Hb_002151_150--Hb_000365_440 Hb_000560_060 Hb_000560_060 Hb_002151_150--Hb_000560_060 Hb_006789_020 Hb_006789_020 Hb_002151_150--Hb_006789_020 Hb_006938_060 Hb_006938_060 Hb_040718_010--Hb_006938_060 Hb_001369_460 Hb_001369_460 Hb_040718_010--Hb_001369_460 Hb_174168_010 Hb_174168_010 Hb_040718_010--Hb_174168_010 Hb_040718_010--Hb_000947_010 Hb_004709_030 Hb_004709_030 Hb_000365_440--Hb_004709_030 Hb_000880_040 Hb_000880_040 Hb_000365_440--Hb_000880_040 Hb_001244_070 Hb_001244_070 Hb_000365_440--Hb_001244_070 Hb_170023_010 Hb_170023_010 Hb_000365_440--Hb_170023_010 Hb_019278_010 Hb_019278_010 Hb_000365_440--Hb_019278_010 Hb_002701_060 Hb_002701_060 Hb_002701_170--Hb_002701_060 Hb_002701_170--Hb_000560_060 Hb_002701_170--Hb_006789_020 Hb_010678_010 Hb_010678_010 Hb_002701_170--Hb_010678_010 Hb_000072_110 Hb_000072_110 Hb_002701_170--Hb_000072_110 Hb_003043_130 Hb_003043_130 Hb_000947_010--Hb_003043_130 Hb_005575_010 Hb_005575_010 Hb_000947_010--Hb_005575_010 Hb_000947_010--Hb_174168_010 Hb_005181_190 Hb_005181_190 Hb_000947_010--Hb_005181_190 Hb_067558_010 Hb_067558_010 Hb_000947_010--Hb_067558_010 Hb_000866_060 Hb_000866_060 Hb_000947_010--Hb_000866_060 Hb_009693_010--Hb_000880_040 Hb_001500_080 Hb_001500_080 Hb_009693_010--Hb_001500_080 Hb_003592_060 Hb_003592_060 Hb_009693_010--Hb_003592_060 Hb_002851_070 Hb_002851_070 Hb_009693_010--Hb_002851_070 Hb_006266_010 Hb_006266_010 Hb_009693_010--Hb_006266_010 Hb_009693_010--Hb_000365_440
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00736924 0.60959 0.210987 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.272948 0.47374

CAGE analysis